PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc031787.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 886aa MW: 101216 Da PI: 8.4942

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc031787.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	27.7	8.7e-09	165	246	7	90
FAR1 7 AkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 A+++GF ++k ksk+ g ++ +f Cs++g++++e + ++ +r++++ +++C +l k k ++ w ++ HnH+++ Cse_sc031787.1_g010.1 165 AESIGFLIVKGKSKTD--RGYKYSIEFLCSRHGTSAREGLE-DELERQTSTAKINCPFRLLAKFIKrQNGWILKVKCPRHNHNFS 246 889******99998..6667************999.8888899999*******99978889988888***986 PP

Sequence ? help Back to Top
Protein Sequence Length: 886 aa Download sequence
MNCTKLHKSH KTAQASQLHK SHKSQTAQSL TSLKLHKHKT QQFTVHKNVL RFSKAKPTQA 60 PHILPGESNN TNNNQPTTTT SGPLPKQEET NNINKWSRTT RRNQQQQPTT INQQQQQVVQ 120 NNNKQQQATT AQATTSQSTM SSSPFNTQEV FGTEVDLTDW VRSTAESIGF LIVKGKSKTD 180 RGYKYSIEFL CSRHGTSARE GLEDELERQT STAKINCPFR LLAKFIKRQN GWILKVKCPR 240 HNHNFSDSFH GFSQAMRLKE SELVFVRQLT KQHVAPRIIL SSLKEIDPNN VSTIKTVYNA 300 QEKIRRDSRG DLTPIQLLLV HLQRQGYTYY PRINDHTNEL DEIFFVHPTS YALWTTYPEI 360 MLMDFTYNTT FFKLPFFTVV EVTPTNTTFS MAFGQTTTCR VESQHALLKL YLGSTQSSLD 420 TLLCSVDKII VAQETAIRAS LNTSKIKKLH ACKSTLFNKL RYNVSMDALQ LILAESKRDV 480 DPHACGHQLR LVYGLPCYHE LFWLQANGLP IPFEMVDNSW RTLSVPWPVV RNTQEPDEPE 540 YPQEPQGPEE PEYFSCQDDV QKFQSVLPKA SSFVKKNMLN KLRGIYAPES VSAQQPAVKE 600 SNRGRPSAKD NKSKSKPNIP DLNEEPPTRH RRSYTKPKKV PDLNEESARH SSYVGEPSNV 660 PDLNEGPNEG PSEGDLRHHL YVLDDFSEYC MAEIPPLLRR WILGIFNVEG DGNCGYRALA 720 VGLGHQEQMW PRIRAIAREE VENNEEVSRQ MWGDYFTSTH NSMNWFEGPA PRRYWMTMPE 780 TGVAIATSLN RPIESDDIQW RDIHYVNNTP ARVESPDYVP SSPSYVPPSP AISPAADEDN 840 FIHHPPPSRV DEYEREIDGL RRRISELESR VGQMAASLER LRLGRD

Sequence ? help Back to Top

Protein Sequence Length: 886 aa Download sequence

MNCTKLHKSH KTAQASQLHK SHKSQTAQSL TSLKLHKHKT QQFTVHKNVL RFSKAKPTQA  60
PHILPGESNN TNNNQPTTTT SGPLPKQEET NNINKWSRTT RRNQQQQPTT INQQQQQVVQ  120
NNNKQQQATT AQATTSQSTM SSSPFNTQEV FGTEVDLTDW VRSTAESIGF LIVKGKSKTD  180
RGYKYSIEFL CSRHGTSARE GLEDELERQT STAKINCPFR LLAKFIKRQN GWILKVKCPR  240
HNHNFSDSFH GFSQAMRLKE SELVFVRQLT KQHVAPRIIL SSLKEIDPNN VSTIKTVYNA  300
QEKIRRDSRG DLTPIQLLLV HLQRQGYTYY PRINDHTNEL DEIFFVHPTS YALWTTYPEI  360
MLMDFTYNTT FFKLPFFTVV EVTPTNTTFS MAFGQTTTCR VESQHALLKL YLGSTQSSLD  420
TLLCSVDKII VAQETAIRAS LNTSKIKKLH ACKSTLFNKL RYNVSMDALQ LILAESKRDV  480
DPHACGHQLR LVYGLPCYHE LFWLQANGLP IPFEMVDNSW RTLSVPWPVV RNTQEPDEPE  540
YPQEPQGPEE PEYFSCQDDV QKFQSVLPKA SSFVKKNMLN KLRGIYAPES VSAQQPAVKE  600
SNRGRPSAKD NKSKSKPNIP DLNEEPPTRH RRSYTKPKKV PDLNEESARH SSYVGEPSNV  660
PDLNEGPNEG PSEGDLRHHL YVLDDFSEYC MAEIPPLLRR WILGIFNVEG DGNCGYRALA  720
VGLGHQEQMW PRIRAIAREE VENNEEVSRQ MWGDYFTSTH NSMNWFEGPA PRRYWMTMPE  780
TGVAIATSLN RPIESDDIQW RDIHYVNNTP ARVESPDYVP SSPSYVPPSP AISPAADEDN  840
FIHHPPPSRV DEYEREIDGL RRRISELESR VGQMAASLER LRLGRD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	302	308	EKIRRDS