PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc031662.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

MYB

Protein Properties

Length: 410aa MW: 45602.4 Da PI: 5.9446

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc031662.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.9	2.1e-17	39	86	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEd++l+d++++ G g+W++ ++ g++R++k+c++rw +yl Cse_sc031662.1_g010.1 39 KGPWTSEEDQKLIDYIERNGHGSWRALPSLAGLNRCGKSCRLRWTNYL 86 79********************************************97 PP
2	Myb_DNA-binding	56.4	7e-18	92	137	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T++E++l+++++ lG++ W++Ia +++ gRt++++k++w+++l Cse_sc031662.1_g010.1 92 RGNFTEDEEKLIIHLHSHLGNK-WSAIATHLP-GRTDNEIKNFWNTHL 137 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 410 aa Download sequence
MVLCICIFVD VYGFNGACTQ IIDQMMGRSS SSDENGLKKG PWTSEEDQKL IDYIERNGHG 60 SWRALPSLAG LNRCGKSCRL RWTNYLRPDI KRGNFTEDEE KLIIHLHSHL GNKWSAIATH 120 LPGRTDNEIK NFWNTHLKKK LLQMGIDPVT HQPRTDHLDI LAHLPQLLAI AANNLGATSL 180 DLNIRDLLNP SLFDMNISAL MSHSDATQIA KFQLLQNILQ VLSPNAPTST ISMPQNIDPF 240 YAIQLSDYLK INPEHLQNLQ ELAMNVTPSA SSLPPFSTHD LRPPTYQTLN LHNDQASKAF 300 CSEQDINRAH GVTVEKEEYL GFESVPALVP ASPEHLDQSY IGNGQSPGAN VNIGLGNSCN 360 LKQKQSEHLS SSDPTSAATT IDANWPGFMD DEASGCYWKE IIERSSPPWS

Sequence ? help Back to Top

Protein Sequence Length: 410 aa Download sequence

MVLCICIFVD VYGFNGACTQ IIDQMMGRSS SSDENGLKKG PWTSEEDQKL IDYIERNGHG  60
SWRALPSLAG LNRCGKSCRL RWTNYLRPDI KRGNFTEDEE KLIIHLHSHL GNKWSAIATH  120
LPGRTDNEIK NFWNTHLKKK LLQMGIDPVT HQPRTDHLDI LAHLPQLLAI AANNLGATSL  180
DLNIRDLLNP SLFDMNISAL MSHSDATQIA KFQLLQNILQ VLSPNAPTST ISMPQNIDPF  240
YAIQLSDYLK INPEHLQNLQ ELAMNVTPSA SSLPPFSTHD LRPPTYQTLN LHNDQASKAF  300
CSEQDINRAH GVTVEKEEYL GFESVPALVP ASPEHLDQSY IGNGQSPGAN VNIGLGNSCN  360
LKQKQSEHLS SSDPTSAATT IDANWPGFMD DEASGCYWKE IIERSSPPWS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16770.2	2e-95	MYB family protein