PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc031551.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 770aa MW: 88970 Da PI: 8.3187

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc031551.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	73.9	3.5e-23	73	178	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk................tekerrtraetrtgCkaklkvkkek 72 +fY+eYA+e+GF+vr+ +k++++ng + f+Cs+eg + + k++ ++ +rr+ra++r+gCka++++++++ Cse_sc031551.1_g010.1 73 QFYKEYAREAGFEVRIGGQKNREKNGYPSVKYFYCSREGLKPPPKTDklqtdkskpdnieavsKVIKRRKRASQRCGCKAQIRLRRTE 160 6*************************************99999889*********999999***************** PP FAR1 73 dgkwevtkleleHnHela 90 d+k++v+++ ++HnH+l+ Cse_sc031551.1_g010.1 161 DNKYYVHTFFEKHNHSLV 178 **************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 770 aa Download sequence
MSTTSLNDSV ELGEPSTPQS TNTVQDNVDV DAQTAPQVGS YQPTPPGSKF WIPEAKKKPV 60 EGTRFDTLDI SLQFYKEYAR EAGFEVRIGG QKNREKNGYP SVKYFYCSRE GLKPPPKTDK 120 LQTDKSKPDN IEAVSKVIKR RKRASQRCGC KAQIRLRRTE DNKYYVHTFF EKHNHSLVHD 180 DDYKYLRAAR KLTFPKQQLL HQLSNTNIGP TRAWKVLIQM GGGFENIGFT DVECRNYRRG 240 LNEFIGQCDA QMVVEKLLSR QEYCTNFSVE YKQHKKDKTL IGLFWVDEQA KLNYDVFGDV 300 VSFDATFRSN RYNMVLVPFT GIDNHNRCIL FGAALLASEA AKRYTWLLKR FKKIFGSAPK 360 VVVTDQDPSM KIAIEKIFPE SRNRLCMWHI MQKLIGKVGP TLCSNTNFKQ RLYDIVWTDQ 420 IDPDMFESEW NSIMDDFGLN ENKWLSDMFK MRSKWIPAYF RHEPMSGLMR TTSRSESENH 480 FLGQITNPYL SLIEFLSHYD TAIDSQRFIY GKNTHNSNYK TPDFRTALQV EKEAAELYTI 540 TIFYDVQDEI WSSLYHCYSL SVQESDTYST FVIRDTEADY RIKDSFVEAK YEVKYVPSEC 600 LVQCSCLRCV SKTKDFSPSS NSACVVDEAL RHIYSDVDES INHLVSDIEK LHIYMDNQTA 660 LMKKAKLEVP NPPKMNTNEA YARALGVTEP KELDILPPTD INNKGHVIRT RHKAKSAIAM 720 QLGDKPKRMC KSCGKYVRHD SRNCPKKKKG LKDQDVDQDF DDAMDIYDSE

Sequence ? help Back to Top

Protein Sequence Length: 770 aa Download sequence

MSTTSLNDSV ELGEPSTPQS TNTVQDNVDV DAQTAPQVGS YQPTPPGSKF WIPEAKKKPV  60
EGTRFDTLDI SLQFYKEYAR EAGFEVRIGG QKNREKNGYP SVKYFYCSRE GLKPPPKTDK  120
LQTDKSKPDN IEAVSKVIKR RKRASQRCGC KAQIRLRRTE DNKYYVHTFF EKHNHSLVHD  180
DDYKYLRAAR KLTFPKQQLL HQLSNTNIGP TRAWKVLIQM GGGFENIGFT DVECRNYRRG  240
LNEFIGQCDA QMVVEKLLSR QEYCTNFSVE YKQHKKDKTL IGLFWVDEQA KLNYDVFGDV  300
VSFDATFRSN RYNMVLVPFT GIDNHNRCIL FGAALLASEA AKRYTWLLKR FKKIFGSAPK  360
VVVTDQDPSM KIAIEKIFPE SRNRLCMWHI MQKLIGKVGP TLCSNTNFKQ RLYDIVWTDQ  420
IDPDMFESEW NSIMDDFGLN ENKWLSDMFK MRSKWIPAYF RHEPMSGLMR TTSRSESENH  480
FLGQITNPYL SLIEFLSHYD TAIDSQRFIY GKNTHNSNYK TPDFRTALQV EKEAAELYTI  540
TIFYDVQDEI WSSLYHCYSL SVQESDTYST FVIRDTEADY RIKDSFVEAK YEVKYVPSEC  600
LVQCSCLRCV SKTKDFSPSS NSACVVDEAL RHIYSDVDES INHLVSDIEK LHIYMDNQTA  660
LMKKAKLEVP NPPKMNTNEA YARALGVTEP KELDILPPTD INNKGHVIRT RHKAKSAIAM  720
QLGDKPKRMC KSCGKYVRHD SRNCPKKKKG LKDQDVDQDF DDAMDIYDSE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	9e-80	FAR1 family protein