PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc031441.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 265aa    MW: 31181.9 Da    PI: 9.456
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc031441.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR128.84.1e-091696789
                   FAR1  7 AkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89
                           A+++GF +++ ksk+    g  ++ +f Cs++g++++e  + ++ +r++++++++C  +l  k  k ++ w +      HnH +
  Cse_sc031441.1_g010.1 16 AESIGFVIVIGKSKTD--RGYKYSIEFLCSRHGTSSREGLE-DELQRQTSTDKINCPFRLLAKFIKrQNGWILRVKCPGHNHIF 96
                           899*********9998..5667***************9999.888999999************999788898888889****75 PP
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    
VFGTEVDLIN WVRSTAESIG FVIVIGKSKT DRGYKYSIEF LCSRHGTSSR EGLEDELQRQ  60
TSTDKINCPF RLLAKFIKRQ NGWILRVKCP GHNHIFPDSF HGFSQAMRLK ESELVFVRQM  120
TKQHRKGYTY YPRINDHTNE LDEIYFVHPT SYALWTTYPK IMLMDSTYNT NMFKLPFFTV  180
VGVTPTNTTF SMAFSFLDKE KKPNFKWVLE CVKLVIQEQY YPRVIVTDRD LALLGACTEE  240
FPNANRLLCR WHINQNVLKH CNRHR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18960.14e-12FAR1 family protein