PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc031281.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 532aa MW: 63082.1 Da PI: 9.6601

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc031281.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	46.4	1.3e-14	100	167	28	90
FAR1 28 itkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.....dgkwevtkleleHnHela 90 t+r+f+C +egk++++ + +k + +++++++gCka +++++++ ++w+vt l+leHnHel Cse_sc031281.1_g020.1 100 KTRRDFYCHREGKPKSKMMDYSKVQINQTSSKCGCKAYMRITLRReneifPEEWQVTILNLEHNHELL 167 5799**************999999***********999864455579***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 532 aa Download sequence
MKQHHVTATI PPPFSHRRYT PLLPRGGAGL HHLNNAGVYH HCHATLHHNH PVERIGVSMN 60 KLCKMLSINH LWVNNFLVKK KHLHFIKILP KKWILNCTWK TRRDFYCHRE GKPKSKMMDY 120 SKVQINQTSS KCGCKAYMRI TLRRENEIFP EEWQVTILNL EHNHELLSMD EVQFLLSYRS 180 ITTEDEKRIL LLKEGGLSIR QIMRVIKSEN SNFQYAFTMD DENKLEHIFW SPPQCFEWYK 240 KYGDKFVLLM TKPPNTILTN QDPWITEAIA KEMPSTKHAF CIWHITAKFS GWFISIFKSL 300 YKLDTREEFE KQWPLVIANY DLGENKHING LYHIKKFWVP TYLREFFFGG MTTTGRWRVH 360 LAIEDVQQKQ IHDTMLVKYK GSYLISQSPL KEQGYQFFTH FAVKKFQEEF GRAIQYTVVE 420 KTCNVFFLLS ITNSQRFTYN KHEVVWDGKV AKCSCKNFEF VGILCRHILS VFLHKDCFDI 480 PLAYLLSRWS RKEVTLSQEV FFENSTSMNN DEVSTEVIKL VQRPPKSKPT YY

Sequence ? help Back to Top

Protein Sequence Length: 532 aa Download sequence

MKQHHVTATI PPPFSHRRYT PLLPRGGAGL HHLNNAGVYH HCHATLHHNH PVERIGVSMN  60
KLCKMLSINH LWVNNFLVKK KHLHFIKILP KKWILNCTWK TRRDFYCHRE GKPKSKMMDY  120
SKVQINQTSS KCGCKAYMRI TLRRENEIFP EEWQVTILNL EHNHELLSMD EVQFLLSYRS  180
ITTEDEKRIL LLKEGGLSIR QIMRVIKSEN SNFQYAFTMD DENKLEHIFW SPPQCFEWYK  240
KYGDKFVLLM TKPPNTILTN QDPWITEAIA KEMPSTKHAF CIWHITAKFS GWFISIFKSL  300
YKLDTREEFE KQWPLVIANY DLGENKHING LYHIKKFWVP TYLREFFFGG MTTTGRWRVH  360
LAIEDVQQKQ IHDTMLVKYK GSYLISQSPL KEQGYQFFTH FAVKKFQEEF GRAIQYTVVE  420
KTCNVFFLLS ITNSQRFTYN KHEVVWDGKV AKCSCKNFEF VGILCRHILS VFLHKDCFDI  480
PLAYLLSRWS RKEVTLSQEV FFENSTSMNN DEVSTEVIKL VQRPPKSKPT YY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	3e-68	FAR1 family protein