PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc031134.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

Trihelix

Protein Properties

Length: 282aa MW: 32948.4 Da PI: 4.4459

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc031134.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	38.1	4e-12	58	146	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrer.gferspkqCkekwenlnkrykkikegekkr..tsessstcpyfdql 85 +W+++ + +L+e+ ++ +l+r++l++ +W ev++k++e ++e++ qC+ ++e l+++ykk+k+ +++ + ++ +f+++ Cse_sc031134.1_g010.1 58 EWSENATFVLLEVWGDRYMQLGRRSLRGEDWVEVAEKISEMcKMEINDGQCRTRFETLKQKYKKEKAKMEGSgmGHGYYGKWGFFKKM 145 5***********************************775378*******************98776652335666789999998 PP trihelix 86 e 86 + Cse_sc031134.1_g010.1 146 D 146 7 PP

Sequence ? help Back to Top
Protein Sequence Length: 282 aa Download sequence
IDDDDDQDDN NNNNEYQQQY YNGGETSTRR HQKKRRLENL VGGYGYAPRG NVTNVMDEWS 60 ENATFVLLEV WGDRYMQLGR RSLRGEDWVE VAEKISEMCK MEINDGQCRT RFETLKQKYK 120 KEKAKMEGSG MGHGYYGKWG FFKKMDMLLS PKRQHNGLPC GVDSGEYVFM NTKVYLNQSN 180 ALDEMRDSPG ESEVDEDEDG LNEEDEEGFK LLAESVQNFG EIYEKIEGRK RQQMLELEKM 240 RMDFQRELEL QKKVILERTQ AEIAKIREED DEDANSVENL SG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24490.1	1e-75	Trihelix family protein