PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc030846.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

bHLH

Protein Properties

Length: 501aa MW: 55366.1 Da PI: 6.8898

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc030846.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	50.4	3.9e-16	299	345	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L+el+P + K +Ka++L +A+eY+ksLq Cse_sc030846.1_g020.1 299 VHNLSERRRRDRINEKMKALQELIPRC-----NKSDKASMLDEAIEYLKSLQ 345 6***********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 501 aa Download sequence
MNHCVPDFQN EEDYLLPATS NSKRHKKSTM GDEDIMELLW QNGQVVMQSQ NNKKVETQQP 60 TTVNHHNNNR STVLDDETTP CNLYMHEDEM VSWLHYPSDD NNNLDLYLHN NDILYPVLPA 120 ADVSHSLQGV STVSVPPPRA STVLTRVGEE QNNQNQNKFG NFSHFSKPNF AKNSATGSAP 180 TSSNKMSEVT TVVESNNQPM DMKKLRGGVM TSSSGREGGE PYDVSASTSS PGTGGSGASA 240 SAEPAAKKSP PVAEDRKRKG RDPAEETECY SEDVEFDYPE AKKQSRGSTS TKRSRAAEVH 300 NLSERRRRDR INEKMKALQE LIPRCNKSDK ASMLDEAIEY LKSLQMQVQM MSMGYGMVPM 360 MLPGLQRYMP PMAAMGMGMG MEHVGMNRPM VPYPAVLPGP PMPNPAAAAH LSQRFPVPRF 420 PMPQIPVMGP ARSQDPMMNS LPLQNANQPR VPFADPYQHY IGLPQTQMPQ PQNQTGTRTP 480 PVTSTPSSSK DVRDPGHQPT G

Sequence ? help Back to Top

Protein Sequence Length: 501 aa Download sequence

MNHCVPDFQN EEDYLLPATS NSKRHKKSTM GDEDIMELLW QNGQVVMQSQ NNKKVETQQP  60
TTVNHHNNNR STVLDDETTP CNLYMHEDEM VSWLHYPSDD NNNLDLYLHN NDILYPVLPA  120
ADVSHSLQGV STVSVPPPRA STVLTRVGEE QNNQNQNKFG NFSHFSKPNF AKNSATGSAP  180
TSSNKMSEVT TVVESNNQPM DMKKLRGGVM TSSSGREGGE PYDVSASTSS PGTGGSGASA  240
SAEPAAKKSP PVAEDRKRKG RDPAEETECY SEDVEFDYPE AKKQSRGSTS TKRSRAAEVH  300
NLSERRRRDR INEKMKALQE LIPRCNKSDK ASMLDEAIEY LKSLQMQVQM MSMGYGMVPM  360
MLPGLQRYMP PMAAMGMGMG MEHVGMNRPM VPYPAVLPGP PMPNPAAAAH LSQRFPVPRF  420
PMPQIPVMGP ARSQDPMMNS LPLQNANQPR VPFADPYQHY IGLPQTQMPQ PQNQTGTRTP  480
PVTSTPSSSK DVRDPGHQPT G

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	304	309	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G20180.2	4e-52	bHLH family protein