PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc030832.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NAC
Protein Properties Length: 329aa    MW: 38280.4 Da    PI: 6.5271
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc030832.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM176.85.9e-55391651129
                    NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 
                            lppGfrFhPtd+el+v+yL +k+ + ++   ++i +vd++k+ePwdLp k+k +ekewyfF+ rd+ky+tg r+nrat+ gyWkatgk
  Cse_sc030832.1_g010.1  39 LPPGFRFHPTDNELIVHYLYPKAMDASFVS-QAIGDVDLNKFEPWDLPLKAKFGEKEWYFFCVRDRKYPTGLRTNRATEMGYWKATGK 125
                            79*************************988.89***************99999*********************************** PP

                    NAM  89 dkevlskkgelvglkktLvfykgrapkgektdWvmheyrle 129
                            dke+++  ++lvg+kktLvfykgrapkgekt+W+mhe+rle
  Cse_sc030832.1_g010.1 126 DKEIYK-AKALVGMKKTLVFYKGRAPKGEKTNWIMHEFRLE 165
                            ******.999****************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    
LQTTKVSTNT SHTKKEKRKR KLAMETNFSN YDHEEQIELP PGFRFHPTDN ELIVHYLYPK  60
AMDASFVSQA IGDVDLNKFE PWDLPLKAKF GEKEWYFFCV RDRKYPTGLR TNRATEMGYW  120
KATGKDKEIY KAKALVGMKK TLVFYKGRAP KGEKTNWIMH EFRLEGKLAI ENISQSTKGE  180
WVISKVFEKN CGGKKIQIYG LSSENYDGCV DDLDSSKLPQ LMDISRSESE TIPNAIQEKM  240
PKNEDLNEAF NKSIEFMPTI NDNPMWFPNT QMVQNMDYLQ YQDPSILRFL IDNDNRSNIL  300
QNPRIEMGHA QDYSTDINGP VELDCLWSY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61430.11e-100NAC family protein