PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc030632.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NAC
Protein Properties Length: 332aa    MW: 37693.3 Da    PI: 8.9011
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc030632.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1691.6e-52141391128
                    NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 
                            lppGfrF Ptdeel+v+yL++kv+g +++l ++i+++d+yk++Pw+Lp+k+  +ekewyfFs+rd+ky++g+r+nr++ sgyWkatg+
  Cse_sc030632.1_g030.1  14 LPPGFRFYPTDEELLVQYLCRKVAGYDFSL-QIIADIDLYKFDPWELPSKAMFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGT 100
                            79***************************9.89***************8777899********************************* PP

                    NAM  89 dkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                            dk +++ +g+ vg+kk Lvfy g+apkg+kt+W+mheyrl
  Cse_sc030632.1_g030.1 101 DKVITT-NGRRVGIKKALVFYVGKAPKGNKTNWIMHEYRL 139
                            ****99.999****************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    
MGLPVTDPMT QLSLPPGFRF YPTDEELLVQ YLCRKVAGYD FSLQIIADID LYKFDPWELP  60
SKAMFGEKEW YFFSPRDRKY PNGSRPNRVA GSGYWKATGT DKVITTNGRR VGIKKALVFY  120
VGKAPKGNKT NWIMHEYRLS DPQRKSGSAR LDEWVLCRIY KKNSSAQKQI SDAQTTEQSH  180
NSSSSCSSQF DDVLESLPEI QDRYFNLPRV NSIKTLINED QKVNIQKYDS GNYDWASIAA  240
FGQGLPEPVP GSQAPSTTTM NVATTMTPIY TTDTKFGRTL EDEVQSGIRS QRVDHPGYIQ  300
SNLNMFTHNH NITNDPFGIR YPTQQGGMGF RQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27410.21e-124NAC family protein