PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc030628.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 918aa MW: 105091 Da PI: 8.1558

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc030628.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	81	2.1e-25	83	173	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 fYn+YA GF +r++ +k+k+++ei+++ +vC keg+++++ ++ +e ++++r rtgCka+l+++k+kdgkw+v+ ++ HnH+ Cse_sc030628.1_g010.1 83 FYNQYAFLHGFGIRIHCDYKNKTTNEIYRKLYVCDKEGFKRQKVNSsNEVSKKRRRDVRTGCKAELRISKTKDGKWYVDIFNDTHNHD 170 **************************************99988856777889999***************************** PP FAR1 89 lap 91 l+p Cse_sc030628.1_g010.1 171 LTP 173 975 PP

Sequence ? help Back to Top
Protein Sequence Length: 918 aa Download sequence
MAKHLSTCIV SSPGPLTLSM ATEMQMQARL IENIDTNGYL VVNDDMWEKP NEDQVNIGCD 60 EIEINNDNIL GKMFNTPDDA YTFYNQYAFL HGFGIRIHCD YKNKTTNEIY RKLYVCDKEG 120 FKRQKVNSSN EVSKKRRRDV RTGCKAELRI SKTKDGKWYV DIFNDTHNHD LTPTPTKVMK 180 HHSHNKFHCS LACKSLMVEL GKSCLRPCQV RKDVNAMKSP NEPNVTSKQC ADILAEERKQ 240 YKGTRYTKKI FEVFQKEWIE AANNLTHETK SKSLEQTSYW VGQVNVDKNI GESYKASNAS 300 IGIEETNCEN GVSSLALWHV QANWTKAIEQ ARDAPSEIKR LKNFLVEFLE DQMIRKKPTE 360 LENAYKDTRA RTSQVDMMPQ ISVRDPVVLN NTKGRPRNAT RVKPPLEVGP VLAKDLTFKR 420 RISDIVWTDR IEPEEFEDLW ERLLVDFDLK GHKWLSDMYN LRHKWIPAYY RDEPMSGLMR 480 ISSRSESENN AYGRLTSIDL TLWEFYNHFD SVVGCQRFSQ RKNDHDSRYT IPDMHTELDL 540 EQEASEIYTR SIFFDVQTEI YASVISCMSV SVSADDSGKK YVIQDTGEDE QISRRHRQVE 600 GVVNEVFYEC KPDEDFYQCD SPDMILREIF RAVEYCVNRY ADDPELLQKF RDHQVHLMAK 660 ADADVSIPKK TNKRDRLASI LGVSQPVETI VNVSTKGYRK RIKSSLERSV NPSGKSRKNC 720 RYCKCSMKDH DQAKCNAIRA EIATKKASDK AAIKESKQKA KFAAKKAKLS DMNACVMALW 780 SSLKEDHTSD WLRVAPVSGL GQTMSARAYR CVLCYRLGVP LFTVQVPCSA CSKVFPEDIY 840 GDHAVSCAGI VGIKHRHNLV RDVLVDICSR SGISARKEVD IGLFGDGDRS LRPADILLYS 900 WDSGRDVCVD LTGSSPXK

Sequence ? help Back to Top

Protein Sequence Length: 918 aa Download sequence

MAKHLSTCIV SSPGPLTLSM ATEMQMQARL IENIDTNGYL VVNDDMWEKP NEDQVNIGCD  60
EIEINNDNIL GKMFNTPDDA YTFYNQYAFL HGFGIRIHCD YKNKTTNEIY RKLYVCDKEG  120
FKRQKVNSSN EVSKKRRRDV RTGCKAELRI SKTKDGKWYV DIFNDTHNHD LTPTPTKVMK  180
HHSHNKFHCS LACKSLMVEL GKSCLRPCQV RKDVNAMKSP NEPNVTSKQC ADILAEERKQ  240
YKGTRYTKKI FEVFQKEWIE AANNLTHETK SKSLEQTSYW VGQVNVDKNI GESYKASNAS  300
IGIEETNCEN GVSSLALWHV QANWTKAIEQ ARDAPSEIKR LKNFLVEFLE DQMIRKKPTE  360
LENAYKDTRA RTSQVDMMPQ ISVRDPVVLN NTKGRPRNAT RVKPPLEVGP VLAKDLTFKR  420
RISDIVWTDR IEPEEFEDLW ERLLVDFDLK GHKWLSDMYN LRHKWIPAYY RDEPMSGLMR  480
ISSRSESENN AYGRLTSIDL TLWEFYNHFD SVVGCQRFSQ RKNDHDSRYT IPDMHTELDL  540
EQEASEIYTR SIFFDVQTEI YASVISCMSV SVSADDSGKK YVIQDTGEDE QISRRHRQVE  600
GVVNEVFYEC KPDEDFYQCD SPDMILREIF RAVEYCVNRY ADDPELLQKF RDHQVHLMAK  660
ADADVSIPKK TNKRDRLASI LGVSQPVETI VNVSTKGYRK RIKSSLERSV NPSGKSRKNC  720
RYCKCSMKDH DQAKCNAIRA EIATKKASDK AAIKESKQKA KFAAKKAKLS DMNACVMALW  780
SSLKEDHTSD WLRVAPVSGL GQTMSARAYR CVLCYRLGVP LFTVQVPCSA CSKVFPEDIY  840
GDHAVSCAGI VGIKHRHNLV RDVLVDICSR SGISARKEVD IGLFGDGDRS LRPADILLYS  900
WDSGRDVCVD LTGSSPXK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	668	674	PKKTNKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-16	FAR1 family protein