PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc030561.1_g030.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | Trihelix | ||||||||
Protein Properties | Length: 210aa MW: 24521.7 Da PI: 5.2047 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 37.7 | 5.3e-12 | 32 | 130 | 2 | 86 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.........rergferspkqCkekwenlnkrykkikege.....kkrtses 75 Wt++e+ aLi+a+ e+ +l r+ l Weev+ k+ + r ++++ qC +k+++l++ry+ + +++ kk++++ Cse_sc030561.1_g030.1 32 WTDDETSALIDAYYEKRLSLMRTTLCDSEWEEVALKVaarchyvlsSTRNMQKTYAQCCHKMDKLRQRYRLEVQRAditkaKKERCPW 119 **********************************************************************887765111112334566 PP trihelix 76 sstcpyfdqle 86 +++++f+++e Cse_sc030561.1_g030.1 120 AQSWVHFKKME 130 66777777775 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 210 aa Download sequence |
MKEENETNIT NSPPQTIKKL ATSHSRGSLS WWTDDETSAL IDAYYEKRLS LMRTTLCDSE 60 WEEVALKVAA RCHYVLSSTR NMQKTYAQCC HKMDKLRQRY RLEVQRADIT KAKKERCPWA 120 QSWVHFKKME CLENGYFLSM GQFLDIPKNG SGLLEDEFVS NEEMNMEMVR EVGSSQSTHL 180 ELEMEETEWN TESQQSLVDW ILGADLQSKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44730.1 | 2e-23 | Trihelix family protein |