PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc030376.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 325aa MW: 37466.5 Da PI: 9.7609

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc030376.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	75.2	1.4e-23	74	179	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk................tekerrtraetrtgCkaklkvkkek 72 +fY+eYA+e+GF+vr+ +k++++ng + f+Cs+eg + + k++ ++ +rr+ra+ r+gCka++++++++ Cse_sc030376.1_g010.1 74 QFYKEYAREAGFEVRIGGQKNREKNGYPSVKYFYCSREGLKPPPKTDklqtdkskpdnieavsKVIKRRKRASIRCGCKAQIRLRRTE 161 6*************************************99999889*********999999***************** PP FAR1 73 dgkwevtkleleHnHela 90 d+k++v+++ ++HnH+l+ Cse_sc030376.1_g010.1 162 DNKYYVHTFFEKHNHSLV 179 **************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 325 aa Download sequence
MSTTSLNDSV ELVGEPSNPQ STNTVQDNVD VDAQTAPQVG SYQPTPPGSK FWIPKAKKKP 60 VEGTRFDKLD IALQFYKEYA REAGFEVRIG GQKNREKNGY PSVKYFYCSR EGLKPPPKTD 120 KLQTDKSKPD NIEAVSKVIK RRKRASIRCG CKAQIRLRRT EDNKYYVHTF FEKHNHSLVH 180 DDDYKYLRAA RKLTFPKQQL LHQLSNANIG PTRAWKVLIQ MGGGFENIGF TDVECRNYRR 240 GLNEFIGQRD AQMVVEKLLS RQEYCTNFSV EYKQHKKDKT LIGLFWVDEH AKLNYDAFGD 300 VVSFDATFRS NRYVCLCKAF VSDFL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-37	FAR1 family protein