PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc030336.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

Nin-like

Protein Properties

Length: 804aa MW: 90454.7 Da PI: 4.6767

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc030336.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	59	9.1e-19	501	550	2	51
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiks 51 +++i le+++k+F ++i +AA L+v+ ++LKriCR++GI+RWP+R ++s Cse_sc030336.1_g030.1 501 KSSICLEEIEKHFGKTIDEAAAILNVSRSTLKRICRNLGIQRWPYRYLQS 550 67899*****************************************9886 PP

Sequence ? help Back to Top
Protein Sequence Length: 804 aa Download sequence
MEKHVSFNLP VENSSKSGSS NSDVLDSMKS RYPCIYQPLN PSNATLEEEE EEDVDDAEDR 60 RYLTSLWVFG TRDIDEPESP LPPSFSNMMV EQNILDAHMI KEKITSALKG LRFREKGVLV 120 QFWSPVPVRK RWLLTTWDQP FGIGVADEGL YAYRLKSELR AIVVDGEDRE ELGPPGRVYS 180 QKLPEWSLDV HDGNNMYGYI DLPVFESSGD SCLGVLEIIT SSNYVDYAFE VQEVSKALKK 240 QNLRSPNTFE DSSFCVSSGV ADERRRHEHE EIFKVLKAVC DIHNLPLAQT WALSGHTSFV 300 AKFGHLEQTC SSFNKSCIGR ACMSTQDLPF YVRDLSMWDF HKACRETHLG KSQGVVGTSF 360 SSCGTRFYRD VTELDEDDYP LAPFARMSGI TSCVAIYITS YDDEYVIEFF LPTCNANEAE 420 LLKLTKTVRE QLKNTSCVQL DILMAPKPLF TEKEEENIEY ESSNSVSVGP SQSVFPYLEK 480 GIADFDTNPT GETRMKGKRS KSSICLEEIE KHFGKTIDEA AAILNVSRST LKRICRNLGI 540 QRWPYRYLQS PPPITLSTEI GVMPPDSENE QQFIDNERND TNKSDINIKL KRTDISVGLE 600 EINEHSADNV KELEDMPLEV MSENSDNESS NSGSVGTILG VVHNRGKGIP QRKRKRSGRV 660 IGLEKIQKHG KPIDEAAAIH YDSMSMVGHS FTNQQEQTNL PDGRAQPNTS IMENLTIKAR 720 YKENTVEFPF IPSDGLVKLE ELIETKFQLG LGSFKIKYED SDGEMILIAC DSALIESVGD 780 SKQPVDPTVL RLLVFASCES QPDA

Sequence ? help Back to Top

Protein Sequence Length: 804 aa Download sequence

MEKHVSFNLP VENSSKSGSS NSDVLDSMKS RYPCIYQPLN PSNATLEEEE EEDVDDAEDR  60
RYLTSLWVFG TRDIDEPESP LPPSFSNMMV EQNILDAHMI KEKITSALKG LRFREKGVLV  120
QFWSPVPVRK RWLLTTWDQP FGIGVADEGL YAYRLKSELR AIVVDGEDRE ELGPPGRVYS  180
QKLPEWSLDV HDGNNMYGYI DLPVFESSGD SCLGVLEIIT SSNYVDYAFE VQEVSKALKK  240
QNLRSPNTFE DSSFCVSSGV ADERRRHEHE EIFKVLKAVC DIHNLPLAQT WALSGHTSFV  300
AKFGHLEQTC SSFNKSCIGR ACMSTQDLPF YVRDLSMWDF HKACRETHLG KSQGVVGTSF  360
SSCGTRFYRD VTELDEDDYP LAPFARMSGI TSCVAIYITS YDDEYVIEFF LPTCNANEAE  420
LLKLTKTVRE QLKNTSCVQL DILMAPKPLF TEKEEENIEY ESSNSVSVGP SQSVFPYLEK  480
GIADFDTNPT GETRMKGKRS KSSICLEEIE KHFGKTIDEA AAILNVSRST LKRICRNLGI  540
QRWPYRYLQS PPPITLSTEI GVMPPDSENE QQFIDNERND TNKSDINIKL KRTDISVGLE  600
EINEHSADNV KELEDMPLEV MSENSDNESS NSGSVGTILG VVHNRGKGIP QRKRKRSGRV  660
IGLEKIQKHG KPIDEAAAIH YDSMSMVGHS FTNQQEQTNL PDGRAQPNTS IMENLTIKAR  720
YKENTVEFPF IPSDGLVKLE ELIETKFQLG LGSFKIKYED SDGEMILIAC DSALIESVGD  780
SKQPVDPTVL RLLVFASCES QPDA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64530.1	4e-84	Nin-like family protein