PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc029568.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 400aa MW: 46528 Da PI: 9.1262

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc029568.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	54.8	3.2e-17	46	140	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevtkle 82 Y++YA+ GF+++k+ ++ + ++g + ++ +C+keg +++ + + ++k++r+++ + tgCka+++++++ +gk++++++ Cse_sc029568.1_g010.1 46 IYSTYAEAGGFQIKKAGQRLT-KSGIVQHKYIMCNKEGAPRHINVDtldpkhHDKQKRNTTLHVTGCKARIRLELDIiSGKYKLIQFI 132 7*************98888.7888999999***9998888899998899999999************9****** PP FAR1 83 leHnHela 90 +HnH l Cse_sc029568.1_g010.1 133 AKHNHMLI 140 ***997 PP

Sequence ? help Back to Top
Protein Sequence Length: 400 aa Download sequence
MRSLRPTLYK HTETPGGSIY WEPHVERIHV SEEGRYYDII EEAIDIYSTY AEAGGFQIKK 60 AGQRLTKSGI VQHKYIMCNK EGAPRHINVD TLDPKHHDKQ KRNTTLHVTG CKARIRLELD 120 IISGKYKLIQ FIAKHNHMLI PKEYKNFTKK QRKLTQAEKM FVVKAATNKI GTTRTDNLLT 180 SMKGGYEYSD GTSYDFKNHQ RDINMFIGES DAQIINKMEN KKTYVPNFIF QYKVEDSELV 240 AMFWADEVAK CNYKEFGDIV YFDATFKSNK YNMVFVPFTS VHNHRKCVTL DVKSYTWLVK 300 AFMTAFSKEP TMVVTNQDGT TKRSIESRQN PAAYRILNKE VANEQAEEDE TVATEIFVDY 360 KKMDRWYVVA DILSDSVFYA DTYSVFSRIV ILTSFQNNIF

Sequence ? help Back to Top

Protein Sequence Length: 400 aa Download sequence

MRSLRPTLYK HTETPGGSIY WEPHVERIHV SEEGRYYDII EEAIDIYSTY AEAGGFQIKK  60
AGQRLTKSGI VQHKYIMCNK EGAPRHINVD TLDPKHHDKQ KRNTTLHVTG CKARIRLELD  120
IISGKYKLIQ FIAKHNHMLI PKEYKNFTKK QRKLTQAEKM FVVKAATNKI GTTRTDNLLT  180
SMKGGYEYSD GTSYDFKNHQ RDINMFIGES DAQIINKMEN KKTYVPNFIF QYKVEDSELV  240
AMFWADEVAK CNYKEFGDIV YFDATFKSNK YNMVFVPFTS VHNHRKCVTL DVKSYTWLVK  300
AFMTAFSKEP TMVVTNQDGT TKRSIESRQN PAAYRILNKE VANEQAEEDE TVATEIFVDY  360
KKMDRWYVVA DILSDSVFYA DTYSVFSRIV ILTSFQNNIF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	4e-27	FAR1 family protein