PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc029488.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 801aa MW: 91091.2 Da PI: 9.8966

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc029488.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	48.8	2.3e-15	130	225	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevtkle 82 +Y++YA + GF+++ s+++k+ r+g + ++ ++C++egk ++ + + ++k+ r+r+ tgC a++k+ ++ +gk+++ k++ Cse_sc029488.1_g020.1 130 MYKAYALRGGFEIKLSSQRKT-RSGFVQHKYLMCNREGKLRNINIDtlksqgNDKAIRNRNLRVTGCMACVKLDLDPvSGKYKLVKFN 216 8*************99998.8899*********8887766788888899999************************** PP FAR1 83 leHnHelap 91 nH+l+p Cse_sc029488.1_g020.1 217 PRDNHTLCP 225 *****96 PP

Sequence ? help Back to Top
Protein Sequence Length: 801 aa Download sequence
MDNIGENTCV QVFEGSVGSV CDVGSEVMSG DDVEGVRIVK EGSDVMSIDD VEGVRIVEEG 60 LLAMNDVGDA ERVRFIVEDD IRKAVTTPKA SLVIHKETPG GSVYWKSNME PELIPKEGVY 120 FDTLDEAIRM YKAYALRGGF EIKLSSQRKT RSGFVQHKYL MCNREGKLRN INIDTLKSQG 180 NDKAIRNRNL RVTGCMACVK LDLDPVSGKY KLVKFNPRDN HTLCPEVYRH LSKTERKMAY 240 SEKLFVMKAK NANIGATVAH HIYSSMKGYN MVFVPFTAID NHRKSVTIAA GMLKSEDTKS 300 YIWLLESFMS AFNKQPTMVV TDQDGAMKKA IAAILPESKH RLCMWHINQK VPAKISKGAS 360 TRLYGICSWN QGDLRKSGXG STLINFMICF ESAMEKQRHI QEQLDFDSMD SMPKLKTKMM 420 IEKHAALVYT RTIFLRVQTE INEGIWDCQI QNVQTGDGCE ITLIRDKNAG EYRTLYKEKK 480 KGKSEAVEKP KVARVQAMYK VLGNLEDGSV VCTCRHFLRF GFLCRHIFCV FKNNDIEKIP 540 EKYILRRWTR DIIPPDLRRK RNRYGEKNET IDRLTNVVIY YKSLVLRNLE DGSVVSTCRH 600 FLRFGFLCRH IFCVFKNNDT EKIPEKYILR RWTRDIIPPD LRRKRNRYGE KNETIDRLTN 660 EATCLVDECL HRLSNDEGKM AEFVEQIRTL KKKVDIAVPN PPSKKDDMEK FIGVPKPKKI 720 DVNNPSGAKN KGGTREVRRK SKREKAIDAS LKPKRKCGEC GVKTNTHTKK TCPLGPKAIA 780 AAKAAAAKAA AEKSMNNTAS N

Sequence ? help Back to Top

Protein Sequence Length: 801 aa Download sequence

MDNIGENTCV QVFEGSVGSV CDVGSEVMSG DDVEGVRIVK EGSDVMSIDD VEGVRIVEEG  60
LLAMNDVGDA ERVRFIVEDD IRKAVTTPKA SLVIHKETPG GSVYWKSNME PELIPKEGVY  120
FDTLDEAIRM YKAYALRGGF EIKLSSQRKT RSGFVQHKYL MCNREGKLRN INIDTLKSQG  180
NDKAIRNRNL RVTGCMACVK LDLDPVSGKY KLVKFNPRDN HTLCPEVYRH LSKTERKMAY  240
SEKLFVMKAK NANIGATVAH HIYSSMKGYN MVFVPFTAID NHRKSVTIAA GMLKSEDTKS  300
YIWLLESFMS AFNKQPTMVV TDQDGAMKKA IAAILPESKH RLCMWHINQK VPAKISKGAS  360
TRLYGICSWN QGDLRKSGXG STLINFMICF ESAMEKQRHI QEQLDFDSMD SMPKLKTKMM  420
IEKHAALVYT RTIFLRVQTE INEGIWDCQI QNVQTGDGCE ITLIRDKNAG EYRTLYKEKK  480
KGKSEAVEKP KVARVQAMYK VLGNLEDGSV VCTCRHFLRF GFLCRHIFCV FKNNDIEKIP  540
EKYILRRWTR DIIPPDLRRK RNRYGEKNET IDRLTNVVIY YKSLVLRNLE DGSVVSTCRH  600
FLRFGFLCRH IFCVFKNNDT EKIPEKYILR RWTRDIIPPD LRRKRNRYGE KNETIDRLTN  660
EATCLVDECL HRLSNDEGKM AEFVEQIRTL KKKVDIAVPN PPSKKDDMEK FIGVPKPKKI  720
DVNNPSGAKN KGGTREVRRK SKREKAIDAS LKPKRKCGEC GVKTNTHTKK TCPLGPKAIA  780
AAKAAAAKAA AEKSMNNTAS N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G06250.1	1e-22	FAR1 family protein