PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc029182.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB
Protein Properties Length: 333aa    MW: 37225.2 Da    PI: 6.0547
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc029182.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding431.1e-131560146
                           TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
                           +g+W +eEde l++ vk++G+++W++I ++  + Rt+k+c++rw +
  Cse_sc029182.1_g010.1 15 KGPWKAEEDEVLLKHVKKYGPRDWSSIRSKGLLQRTGKSCRLRWVN 60
                           79*************************8887799**********87 PP
2Myb_DNA-binding37.46.1e-1271110344
                            SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS
        Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44 
                            +++++E+   +++  ++G++ W++Ia +++ gRt++++k++w
  Cse_sc029182.1_g010.1  71 KFSADEERVVIELQGEFGNK-WARIATYLP-GRTDNDVKNFW 110
                            79******************.*********.*********** PP
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    
MERVRMYDDL GEIKKGPWKA EEDEVLLKHV KKYGPRDWSS IRSKGLLQRT GKSCRLRWVN  60
KLRPDLKNGV KFSADEERVV IELQGEFGNK WARIATYLPG RTDNDVKNFW SSRQKRLARV  120
LQTPTPPPVP KSKKSVSGSP ALHKVPAFEA PKRSSSTDGE SSVTSPKTLS CSSSYCEPIK  180
MVPLPEHMNP TGPTNLLSYG QNHPLCHLNY TTIPVEENSS NMPPDHPLLQ DFPHVPQVEL  240
PPSLPPLPPL LDSQDIYSQL ADPNFYAVFG HGGSSEIVEF PYMPPGGEGG ESGGSCGRHE  300
NDDPMMMAPD MFMDDFPMDM FDNIEPLPSP SDW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60460.12e-70MYB family protein