PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc029158.1_g040.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

G2-like

Protein Properties

Length: 390aa MW: 44439.4 Da PI: 7.8274

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc029158.1_g040.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.8	4.3e-32	80	133	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtpeLH++Fv+a+e+LGG+ekAtPk++l+lm+v gL+++hvkSHLQ+YR+ Cse_sc029158.1_g040.1 80 PRLRWTPELHHAFVNAIERLGGQEKATPKSVLQLMNVRGLSIAHVKSHLQMYRS 133 8****************************************************7 PP
2	Myb_DNA-binding	49.7	8.7e-16	81	132	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++ +v+a+++lGg t+k++ + m+ g++ ++ks++q+y+ Cse_sc029158.1_g040.1 81 RLRWTPELHHAFVNAIERLGGQekaTPKSVLQLMNvRGLSIAHVKSHLQMYR 132 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 390 aa Download sequence
MSGDLDMLES NEESSFDQYG ENTSSISSIN KHVTSFDLNE EASSQEDQDL SIEDDERAEE 60 GSSSKNRKGP VRQYVRSKMP RLRWTPELHH AFVNAIERLG GQEKATPKSV LQLMNVRGLS 120 IAHVKSHLQM YRSKKLDDSG QVLSHRATTM TQGRPHIYSN LYSRSSPYEN LKLANGGIVL 180 ARNLEEGNHH SRSHLHESAF RPTHSIQHLL SRHQLWLSNQ SLMSSSLRRE FAHGNNMMKD 240 NMNHMHETPS GSNKLCDSRI RNGPMRPSQF LEEKKWPPQD KRKEKWLPIT GTCTSSTSSD 300 PFSVSGCQWY CREGTRILNS QSPFSDSTPI SNFQSEASFL HALTTEGWKD KERKPDLQLR 360 LSQHKGPDEE NHKRSTPEIN TMLSLSLNET

Sequence ? help Back to Top

Protein Sequence Length: 390 aa Download sequence

MSGDLDMLES NEESSFDQYG ENTSSISSIN KHVTSFDLNE EASSQEDQDL SIEDDERAEE  60
GSSSKNRKGP VRQYVRSKMP RLRWTPELHH AFVNAIERLG GQEKATPKSV LQLMNVRGLS  120
IAHVKSHLQM YRSKKLDDSG QVLSHRATTM TQGRPHIYSN LYSRSSPYEN LKLANGGIVL  180
ARNLEEGNHH SRSHLHESAF RPTHSIQHLL SRHQLWLSNQ SLMSSSLRRE FAHGNNMMKD  240
NMNHMHETPS GSNKLCDSRI RNGPMRPSQF LEEKKWPPQD KRKEKWLPIT GTCTSSTSSD  300
PFSVSGCQWY CREGTRILNS QSPFSDSTPI SNFQSEASFL HALTTEGWKD KERKPDLQLR  360
LSQHKGPDEE NHKRSTPEIN TMLSLSLNET

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	4e-35	G2-like family protein