PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc028639.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | G2-like | ||||||||
Protein Properties | Length: 280aa MW: 31094 Da PI: 6.2423 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 100.2 | 1.3e-31 | 19 | 75 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ..kYRl 55 k+rlrWt+eLHerFv+av+qLGG+++AtPk +l++m+v+gLt++hvkSHLQ kYRl Cse_sc028639.1_g010.1 19 KQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQvgKYRL 75 79*************************************************888998 PP | |||||||
2 | Myb_DNA-binding | 58 | 2.1e-18 | 21 | 69 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwq 45 r+rWT e++e++vdav+qlGg+ t+k + r mg +g+t +++ks++q Cse_sc028639.1_g010.1 21 RLRWTHELHERFVDAVAQLGGPdraTPKGVLRVMGvQGLTIYHVKSHLQ 69 89**********************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 280 aa Download sequence |
MDVVNGSNGL NNSSSLASKQ RLRWTHELHE RFVDAVAQLG GPDRATPKGV LRVMGVQGLT 60 IYHVKSHLQV GKYRLAKYLP DSSSEGKAFD QKESGDMLSS LDGSSGMQIT EALKLQMEVQ 120 KRLHEQLEVQ RQLQLRIEAQ GKYLKKIIEE QQRLSGVLSE TPASEDNCLD SKNITDPVTP 180 APPAFESPIM ETAAKECVQV KNTCVDERGE PSTPDSGCHM DSPIENQLGE RSMKKQRVSM 240 SMGLTHQILE SSMRSPFHQQ QQSVYLTTEQ FGHSSGINED |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G01060.1 | 5e-85 | G2-like family protein |