PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc028472.1_g020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | NAC | ||||||||
Protein Properties | Length: 405aa MW: 44688.1 Da PI: 4.6372 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 151.4 | 4.3e-47 | 7 | 134 | 2 | 129 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatg 87 pGfrFhPtd+elv++yLkkkv gkk+ + +v++ev+iy++ PwdL+ k ++k+++ ew+fF++++kky++g+r nrat+ g+Wkatg Cse_sc028472.1_g020.1 7 IPGFRFHPTDSELVMYYLKKKVLGKKIIV-DVVTEVNIYEYSPWDLRdKsALKTGDLEWFFFCPKSKKYNSGSRYNRATEIGFWKATG 93 69************************999.99**************85347777888******************************* PP NAM 88 kdkevlskkgelvglkktLvfykgrapkgektdWvmheyrle 129 kd++v+ +g++v + ktLvf+ g+a kge+tdWvmheyrle Cse_sc028472.1_g020.1 94 KDRNVTY-RGRTVATIKTLVFHIGHAGKGERTDWVMHEYRLE 134 *******.9999****************************85 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 405 aa Download sequence |
MARSSFIPGF RFHPTDSELV MYYLKKKVLG KKIIVDVVTE VNIYEYSPWD LRDKSALKTG 60 DLEWFFFCPK SKKYNSGSRY NRATEIGFWK ATGKDRNVTY RGRTVATIKT LVFHIGHAGK 120 GERTDWVMHE YRLEDEQLAN AGVVQDTYVL IKLFEKAGSG PKNGAQYGAP FNEEEWEDDD 180 IANCSNALAT VGPLEATTTN PLGYKQKGPA TGNMYEPGSS AVTCSANETT GNTNPLGYKQ 240 KGPATVNMYE PRLSAVTCSA NETTGKIAHY KQKSTAPMEM MVAPQITHNL CLTEPESSIV 300 TLSANERRGD VPVGGDDMMS LEDIAFLLGV SEDNNTNELV EVENVEKNDI MAPNADDGIY 360 NELVNLINLD EFNGGASASG SKPAVYMFDK PLDDLDFNLG AFYVD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G64060.1 | 5e-66 | NAC family protein |