PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc028280.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 595aa MW: 67469.5 Da PI: 8.1605

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc028280.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	39.7	1.6e-12	179	273	2	79
FAR1 2 fYneYAkevGFsvrkskskkskrng.eitkrtfvCskegkreeekkk................tekerrtraetrtgCkaklkvkkek 72 Y++YA+e GF+vrk ++ +k+n+ e ++ f+C ++g++ ++k ++++rr+ra+ r+gC+a+l++kk++ Cse_sc028280.1_g010.1 179 AYKDYAREGGFEVRKGGQRVTKDNKvEPNNKYFYCVRQGFKPQHKPGnqktdkqqttnplgvnKVTKRRKRASCRCGCTAQLRLKKTT 266 5*************9999866652678899****988776678999******9999*******************9 PP FAR1 73 dgkwevt 79 dgk ++ Cse_sc028280.1_g010.1 267 DGKRGLN 273 8886555 PP

Sequence ? help Back to Top
Protein Sequence Length: 595 aa Download sequence
LNDKLSQSYN LNENCKNCNS LYNVLCTGEP VTPRAVNNDR DTFGDSNFTP PPHQVGSFQP 60 TPNGTKYWVP IVDKKPFEGQ VFDNIELAQK AYKDYAREGG FEVRKGGQRV TKDIKHNDQD 120 TFGDSNFTPP FGDSNFTPPP HQVGSFQPTP NGTKYWVPRV DKKPFEGQVF DNIELAQKAY 180 KDYAREGGFE VRKGGQRVTK DNKVEPNNKY FYCVRQGFKP QHKPGNQKTD KQQTTNPLGV 240 NKVTKRRKRA SCRCGCTAQL RLKKTTDGKR GLNEFIGNRD AQMVVDKLLS RAEYFEDYFM 300 EYKQDKKSKE LVGLLWADEQ AKRNYAAFGD VVSFDATFHS NRYHGSVSNS SKFIEFCFLI 360 SVLLGTNRCL ALCAQHXTHD SNYITPDLKT HLEVEKEAAE LYTHTVFYDV QDEICASLFH 420 CCSLSVHKDD TSLTYLVHDI EADYILKGVP FEVKYERRWS KNALPIKIAR RPADVFNSSN 480 PECVNGVVRE IYGTVEDSLK IDIPIAPELN KKELYAAALG VKEPVAVDII APECRNKGSV 540 SLKRHQTQAE IAISQSNKAS RHCSYCDTYG YHDSRNCPKK KADLAQLSDA SQYEE

Sequence ? help Back to Top

Protein Sequence Length: 595 aa Download sequence

LNDKLSQSYN LNENCKNCNS LYNVLCTGEP VTPRAVNNDR DTFGDSNFTP PPHQVGSFQP  60
TPNGTKYWVP IVDKKPFEGQ VFDNIELAQK AYKDYAREGG FEVRKGGQRV TKDIKHNDQD  120
TFGDSNFTPP FGDSNFTPPP HQVGSFQPTP NGTKYWVPRV DKKPFEGQVF DNIELAQKAY  180
KDYAREGGFE VRKGGQRVTK DNKVEPNNKY FYCVRQGFKP QHKPGNQKTD KQQTTNPLGV  240
NKVTKRRKRA SCRCGCTAQL RLKKTTDGKR GLNEFIGNRD AQMVVDKLLS RAEYFEDYFM  300
EYKQDKKSKE LVGLLWADEQ AKRNYAAFGD VVSFDATFHS NRYHGSVSNS SKFIEFCFLI  360
SVLLGTNRCL ALCAQHXTHD SNYITPDLKT HLEVEKEAAE LYTHTVFYDV QDEICASLFH  420
CCSLSVHKDD TSLTYLVHDI EADYILKGVP FEVKYERRWS KNALPIKIAR RPADVFNSSN  480
PECVNGVVRE IYGTVEDSLK IDIPIAPELN KKELYAAALG VKEPVAVDII APECRNKGSV  540
SLKRHQTQAE IAISQSNKAS RHCSYCDTYG YHDSRNCPKK KADLAQLSDA SQYEE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28530.1	1e-07	FAR1 family protein