PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc028267.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 311aa    MW: 34352.5 Da    PI: 6.1654
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc028267.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.11.4e-20126175255
                    AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                             y+GVr+++ +g+WvAeIr p++   r+r +lg+f+taeeAa a++ a+ kl+g
  Cse_sc028267.1_g020.1 126 LYRGVRQRH-WGKWVAEIRLPKN---RTRLWLGTFDTAEEAALAYDIAAYKLRG 175
                            59******9.**********965...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MASATMDLWN LDFQQFNGGE LMDALEPFIK QDQNYQNTLP YSLPSTSYPS PTQDLSGFYP  60
DPSFTHDPFF NPQPVSSFGL NQLTPSQIHQ IQAQINLPNF NPTYLGPKPI PMKQTGSGSP  120
PKPTKLYRGV RQRHWGKWVA EIRLPKNRTR LWLGTFDTAE EAALAYDIAA YKLRGDYARL  180
NFPHLRHNGS HIAGACGDYA PLHSSVDAKL QAICQNLAEG KSVDGGKKKS QRRSTVVKPP  240
VKLPATEVEQ PEVVKIEGLS ESSSSGGSSP VSEISELSFP EFTAEDGGAW GASDCFLLEK  300
YPSYEIDWGS I
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78080.17e-79ERF family protein