PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Cse_sc028164.1_g030.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
|
||||||||
Family | WRKY | ||||||||
Protein Properties | Length: 330aa MW: 36322.3 Da PI: 10.3592 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 98.4 | 4.5e-31 | 257 | 314 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D y+WrKYGqK++kgs++pr+YY+C+s gCp++k+ver+ +d ++++tYegeHnh+ Cse_sc028164.1_g030.1 257 DDYSWRKYGQKPIKGSPHPRGYYKCSSLrGCPARKHVERALDDAAMLIVTYEGEHNHS 314 99************************998****************************7 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 330 aa Download sequence |
MAVDLMNTST NTLLHTKMEQ INFQEAATAG LQSVENLIRI LSTQQKSKFN DTTSSSSLTA 60 APATDYVAVA DVAVNKFKKF ISLLDRNRTG HARFRRGPAP IKQNKTTLFS VALALEKEKE 120 KEKVYSPAPI QQRMPPVSLV KSGSFDRKEF PVTTINFASS KANSFMSSLT GDSESLQPSM 180 SSSGFQITNL SQVSMSGGQS NMSNSSFKRK CNSMDDSHAK CANSSGRCHC SKKRKSRMKR 240 VVRVPAISMK MADIPPDDYS WRKYGQKPIK GSPHPRGYYK CSSLRGCPAR KHVERALDDA 300 AMLIVTYEGE HNHSHNVNDS PAAIVLESAS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G24240.1 | 4e-70 | WRKY family protein |