PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc028097.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 302aa    MW: 33739.1 Da    PI: 4.9736
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc028097.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2643.2e-20188239256
                    AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                            +y+GVr+++ +g+++AeIrdp++  +  r++lg+f tae+Aa+a+++a+ +++g+
  Cse_sc028097.1_g030.1 188 RYRGVRRRP-WGKYAAEIRDPNN--QGVRVWLGTFATAEDAARAYDRAAFQMRGH 239
                            69*******.**********944..44**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
MVDSHLSETM QMQSVLQASI ITTPNTNTNI NNSTIPPQQH HETYYPPRHG CSNCEQTAQT  60
TDRTRVMVHE FQEEIDTTAA SKRVNDDGST ASMGDNVSST TGNKSQANFN EVFPTIETTL  120
GKQTVEPVRI MHESNFEGFG GHNDANLATK IRDIESLMLE GKLVLMDQGG GTSKENRKDA  180
SGGQDEVRYR GVRRRPWGKY AAEIRDPNNQ GVRVWLGTFA TAEDAARAYD RAAFQMRGHM  240
AVLNFPAEYR PNFSAATYNA STMANASSSS MGSREVFEFE CMDDKLLEDL LDYENYDYNN  300
KK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23230.13e-20ERF family protein