PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc028012.1_g020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | bHLH | ||||||||
Protein Properties | Length: 261aa MW: 29200.1 Da PI: 4.8546 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 43.6 | 5.4e-14 | 121 | 167 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h +ErrRR+++N+ f L ++lP++ kK++Ka++Le A +YIk+Lq Cse_sc028012.1_g020.1 121 DHVFAERRRREKLNQNFISLSSVLPSL-----KKMDKASMLEDASNYIKELQ 167 57789**********************.....9******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 261 aa Download sequence |
MEDPLFMSDD QMNILSDDVN NFSVNSFYSE IYAETTTCID QTFQTQQPEI RQETSSSISK 60 SSTTLDPLVT NSLPSSKTFT ISFGDLKPKE ETLQFHDSLG YEAARTTKVS ITLRNPIQAQ 120 DHVFAERRRR EKLNQNFISL SSVLPSLKKM DKASMLEDAS NYIKELQGRV KELEGTLKPD 180 NKRKNVDQES GSNVTVTIQC QNNSSSFIKA LTQMQKLGLS IICSSAMPFV MTILLITIVA 240 QIVDDFSMTP AELAKSLQLA I |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 126 | 131 | ERRRRE |
2 | 127 | 132 | RRRREK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37850.1 | 5e-25 | bHLH family protein |