PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc027675.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family bHLH
Protein Properties Length: 314aa    MW: 35157.3 Da    PI: 4.5426
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc027675.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.50.000262692881029
                            HHHHHHHHHHHHHHHCTSCC CS
                    HLH  10 rrRRdriNsafeeLrellPk 29 
                            r+RR+riN+++  L+ ll +
  Cse_sc027675.1_g010.1 269 RKRRERINERLKVLQNLLLS 288
                            9****************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MESFGSFFDE EWESLSRMFS CDQYSDHGLY SSEQDHGLNF EIPSFVSSLI TEANNANSSS  60
IDHNDFHYTS ENVNSYHYYS QETSNNVNEC VAYDGSVSLS YPSSNTIPLP TNGVYEHESM  120
NLYNENNNIS SLQAPVFSDD SMEPMVPNAD QCTHMAVNGK IEMPESPLEE KVNEDKPDEK  180
PKKRARVTKD NKNKKKAQPK KKQKVIDSAS NENGIDGEDT NINKGGNAPI ASSSSCSSED  240
DLNGGGDNVN WKTRAGRGAA TDPQSLYARK RRERINERLK VLQNLLLSSD EMWMYAPIAY  300
NGMDMGLYQR LSQS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.17e-27bHLH family protein