PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc027610.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ARR-B
Protein Properties Length: 315aa    MW: 35776.9 Da    PI: 8.4752
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc027610.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like59.57.2e-19162212354
                G2-like   3 rlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYR 54 
                             ++Wt eLH++F++a +qL G+ +  P +i++lm+v+gLt+ +v+SHLQ+ R
  Cse_sc027610.1_g010.1 162 HIEWTMELHTKFISATRQL-GEGRCYPMEIVKLMNVPGLTRMQVASHLQRCR 212
                            689****************.9****************************988 PP
2Myb_DNA-binding24.27.8e-08164211347
                            SS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHH CS
        Myb_DNA-binding   3 rWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqky 47 
                             WT e++ +++ a +qlG g   +  I + m+  g+t+ q+ s++q  
  Cse_sc027610.1_g010.1 164 EWTMELHTKFISATRQLGEGrcYPMEIVKLMNvPGLTRMQVASHLQRC 211
                            5*********************9**********************975 PP
3Response_reg23.72.3e-0998729107
                            ESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTESEEEESS--HHHH CS
           Response_reg  29 addgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGakdflsKpfdpeel 107
                              d+ +al+ll ek+  +Dl+l+D e+ ++d +++l++     ++l  ++++ +++++ ++ealk Ga  +l Kp   + +
  Cse_sc027610.1_g010.1   9 IHDACAALKLLSEKKneYDLLLVDREITNVDIHTFLRSADI--KELLSMAMSEEDDDDFLVEALKSGAFLVLKKPLTVDVI 87 
                            56788999999777777********9999999999876444..56999***************************987766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MLLLLVTCIH DACAALKLLS EKKNEYDLLL VDREITNVDI HTFLRSADIK ELLSMAMSEE  60
DDDDFLVEAL KSGAFLVLKK PLTVDVIMLI HQHVIREKML KHGKCKNKTT SHNVATRVQT  120
NLQESRSCGS KRKERGSPRK DDITSYQSSE DNDVYDIMKR NHIEWTMELH TKFISATRQL  180
GEGRCYPMEI VKLMNVPGLT RMQVASHLQR CRGGRWEVKE KRQVLAPSKS RERDYAIKHG  240
RMPSTDEDRS SKITDLTLSL NGCQTEANLM TNQAARGSPV MNGFSPQNIA GQGSIDDAYS  300
SNQRQAYNGF IDFLK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.14e-24ARR-B family protein