PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc027566.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NAC
Protein Properties Length: 300aa    MW: 34544.1 Da    PI: 5.9552
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc027566.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM150.76.8e-47101371128
                    NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 
                            lppGfrFhP+deel+++yL +kv+ +++++ +vi e+++y+++PwdLp+k+  +++ew+fFs+rd+ky++g+r+nr++ sgyWkatgk
  Cse_sc027566.1_g020.1  10 LPPGFRFHPSDEELINYYLLNKVNMRPIPA-SVIGEIELYNFDPWDLPRKALFGKEEWFFFSPRDRKYPNGSRPNRSAGSGYWKATGK 96 
                            79****************************.99***************87778999******************************** PP

                    NAM  89 dkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                            dk+++++ + +++g+kk L+f+ g+  ++ kt+W+m eyrl
  Cse_sc027566.1_g020.1  97 DKPIFASsGLRKIGVKKALAFFAGNPTQSIKTNWTMSEYRL 137
                            *****9867788***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    
MDNGEDFLHL PPGFRFHPSD EELINYYLLN KVNMRPIPAS VIGEIELYNF DPWDLPRKAL  60
FGKEEWFFFS PRDRKYPNGS RPNRSAGSGY WKATGKDKPI FASSGLRKIG VKKALAFFAG  120
NPTQSIKTNW TMSEYRLPES SSRSSRQNGS MRLDDWVLCR ITQKGNNSKN KPQVEENPKN  180
KVTQSQFPII PQELPSSYMI TKANMDIISD RRFKEFQLMA SILAAQDLPS MMETCSPKLI  240
QDASNSLLFK NGAIDKEKNP FILNEDNIRY EDIYPVDMFT SDDSYEDLDT DNLDIMFKQL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61110.12e-70NAC family protein