PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc027507.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family bHLH
Protein Properties Length: 272aa    MW: 31312 Da    PI: 6.2715
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc027507.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.83e-11140187455
                            HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                    HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                            +h+ +Er RR++i +++ +L+ ++P +    +k   Ka +L ++++Y++sLq
  Cse_sc027507.1_g030.1 140 SHSLAERVRRQKISEKMKTLQAIIPGC----DKITGKAHMLDEVINYVQSLQ 187
                            8*************************9....899*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    
MEASPTHHQH HLLLADQCLS SRNIATTNTV SDHDEFIPHS SIEVIAHGIL ASNENNLQSS  60
NSLMFIHDDK LGRKMPTTNS TSSNDVQSKD MTKETCKRWR KQKKSNDVQQ DKKKVRDSKE  120
EEEQRGYIHV RARRGEATDS HSLAERVRRQ KISEKMKTLQ AIIPGCDKIT GKAHMLDEVI  180
NYVQSLQNEI QILSLKLASV NPINDYEADL EAFTVKPHQN MTTNQQEQLS FHEYQMPCML  240
SQNHEEALWD LEEQRQGLDD DLFAIINYNS LY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50915.22e-44bHLH family protein