PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc027403.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family C3H
Protein Properties Length: 204aa    MW: 22313.9 Da    PI: 5.6123
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc027403.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH17.29.1e-0644591126
                           GTS--TTTTT-SS-SS CS
                zf-CCCH 11 rtGtCkyGdrCkFaHg 26
                           r+GtC  G+rC++ H+
  Cse_sc027403.1_g010.1 44 RMGTCVNGSRCRYDHV 59
                           78*************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    
MSPNRQGVSP PTTGDAGDIQ EDQGLNDIEL TYIGVLDSTV EAPRMGTCVN GSRCRYDHVK  60
VAQPKVNAYA SSSTYPYQFG VSETVSQTTD PCVIGELSAS SRPYVASAQS VWGEVTGENE  120
LLNDVVQARS TNPADILMCS FAAAGNCPRG ENCPHVHGDL CPTCRKVYLH PFRPAEREEH  180
KTMCEKNINK LWNFPKTSGY YCKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G08505.11e-24C3H family protein