PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc027048.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

bHLH

Protein Properties

Length: 403aa MW: 44752.8 Da PI: 7.5205

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc027048.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	14.5	6.3e-05	300	338	12	55
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 R +++ ++++ L++++ + +K + a++L +A+ YIk Lq Cse_sc027048.1_g010.1 300 RKEKLGDRIAALQQMVAPF-----GKTDTASVLMEAIGYIKFLQ 338 7788899*******998.....8****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 403 aa Download sequence
MESANFHQQQ HQEHQPVLDS SCYGLSWSQN PSLNNTSNTN SRENIHLVPC HNASPPMLGL 60 PWNTTTSSNV TSNPIENFMT HELQRLARIK DEFSASESYQ RFSEMINSSP TSSVEDLHLN 120 PSPGYHNNQD SLLRTFSNEC QIKGSQVMDQ FPDDPQNNLY QNCSRGTFSQ IFPTINVSNL 180 NQSRAASVSS NSFDMNLPAL DLFGSPRFNG NFSHSSFNPH QLGSFFKDTC LSCGLDQMHQ 240 SNNRPAIFPS KISSAFNTRT SCTEAKRPAT NYMDTKAPQA TVPKKSKVEP RASCAPFKVR 300 KEKLGDRIAA LQQMVAPFGK TDTASVLMEA IGYIKFLQNQ VETLSVPYMK STQKNNRLPT 360 HGVSLDEGNE EPKRDLRSRG LCLVPLSCLS YVTDGGGGVW QGP

Sequence ? help Back to Top

Protein Sequence Length: 403 aa Download sequence

MESANFHQQQ HQEHQPVLDS SCYGLSWSQN PSLNNTSNTN SRENIHLVPC HNASPPMLGL  60
PWNTTTSSNV TSNPIENFMT HELQRLARIK DEFSASESYQ RFSEMINSSP TSSVEDLHLN  120
PSPGYHNNQD SLLRTFSNEC QIKGSQVMDQ FPDDPQNNLY QNCSRGTFSQ IFPTINVSNL  180
NQSRAASVSS NSFDMNLPAL DLFGSPRFNG NFSHSSFNPH QLGSFFKDTC LSCGLDQMHQ  240
SNNRPAIFPS KISSAFNTRT SCTEAKRPAT NYMDTKAPQA TVPKKSKVEP RASCAPFKVR  300
KEKLGDRIAA LQQMVAPFGK TDTASVLMEA IGYIKFLQNQ VETLSVPYMK STQKNNRLPT  360
HGVSLDEGNE EPKRDLRSRG LCLVPLSCLS YVTDGGGGVW QGP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G27660.1	7e-62	bHLH family protein