PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc026968.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 530aa MW: 61047.7 Da PI: 9.4127

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc026968.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	33.2	1.7e-10	113	168	47	90
FAR1 47 k............tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 k ++ + r+ra++r+gCka l+++++ ++k++v+++ ++HnH+l+ Cse_sc026968.1_g010.1 113 KtdtpssdiaevvKVIKTRKRASQRCGCKALLRLRQTPENKYVVYTFFEKHNHSLV 168 1445666677776777899***********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 530 aa Download sequence
MTVSADVNSG ISDYISESLI KLSSEIAERP QCEPSTPRPT NTVQDNVVDV ESVPQAGSYQ 60 PTPPGSKFWI PEAKKKPVEG TDFDTIEKAL QFYKEEGVKP ASKADNPKKD KSKTDTPSSD 120 IAEVVKVIKT RKRASQRCGC KALLRLRQTP ENKYVVYTFF EKHNHSLVHE NDYKYLRAAR 180 KLAFSKQTLL RQLSNANIGP TRAWKVMKEM YGGFENIRVT DVECRNYRRG LDNFIGNRDA 240 QMVVEKLLSR HEFFSDFSVE YKQDKKDKTL VGLFWADSQA KLNYAAFGDV VSFDATFRYK 300 MVLVPFTGID NHNRCILFGA ALLASESAKR YTWLLKRFKK IFGNAPKVVV TDQDPTMKIA 360 IEKIFPDSRH RLCMWHIMQK LSGKVGPSLC SNTDFKRRLC DIVWTDKIDP NVFESEWVSI 420 MNDFNLTDNK WLTDMFGMPT KWIPAYFRHE PMSGLMRTTS RFESENHFLG KITNPHLSLV 480 EFLSHYDTAI DLQRFIYGKN THDSNYKTPD FKTHLQIEKE AAAFYTHNFL

Sequence ? help Back to Top

Protein Sequence Length: 530 aa Download sequence

MTVSADVNSG ISDYISESLI KLSSEIAERP QCEPSTPRPT NTVQDNVVDV ESVPQAGSYQ  60
PTPPGSKFWI PEAKKKPVEG TDFDTIEKAL QFYKEEGVKP ASKADNPKKD KSKTDTPSSD  120
IAEVVKVIKT RKRASQRCGC KALLRLRQTP ENKYVVYTFF EKHNHSLVHE NDYKYLRAAR  180
KLAFSKQTLL RQLSNANIGP TRAWKVMKEM YGGFENIRVT DVECRNYRRG LDNFIGNRDA  240
QMVVEKLLSR HEFFSDFSVE YKQDKKDKTL VGLFWADSQA KLNYAAFGDV VSFDATFRYK  300
MVLVPFTGID NHNRCILFGA ALLASESAKR YTWLLKRFKK IFGNAPKVVV TDQDPTMKIA  360
IEKIFPDSRH RLCMWHIMQK LSGKVGPSLC SNTDFKRRLC DIVWTDKIDP NVFESEWVSI  420
MNDFNLTDNK WLTDMFGMPT KWIPAYFRHE PMSGLMRTTS RFESENHFLG KITNPHLSLV  480
EFLSHYDTAI DLQRFIYGKN THDSNYKTPD FKTHLQIEKE AAAFYTHNFL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-61	FAR1 family protein