PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc026927.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family B3
Protein Properties Length: 405aa    MW: 45846.1 Da    PI: 3.6993
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc026927.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B349.67.1e-16147233692
                            ..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE..EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS
                     B3   6 tpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr..yvltkGWkeFvkangLkegDfvvFkldgrsefe 91 
                            ++s+ ++++ l++p kf++   ++++e  t+tle+ +g + e+ ++ +kks++  y+ t+GWkeF ++n++ egD +vFk++ ++++ 
  Cse_sc026927.1_g010.1 147 LTSSKSNKNKLRFPPKFVALARIDTRE--TITLENYDGSEKEISVQSDKKSKStsYYVTAGWKEFQRSNDISEGDKCVFKFITSEDKI 232
                            3567777777********777777655..78888888866666666677776667*************************99766664 PP

                            . CS
                     B3  92 l 92 
                            +
  Cse_sc026927.1_g010.1 233 C 233
                            4 PP
Sequence ? help Back to Top
Protein Sequence    Length: 405 aa     Download sequence    
MLVCCLGSSS CLDILVPKIK VPSFKVVDYG CIDDDDVDDE VEEVDDVVYD VDDDGDDDDD  60
DDDDDHHHHH VEDEDDVEFV DDGDEDDVEF VNDGDKDDGM EEDDDVLYDV DDDDDVEDED  120
DIEFVYDSDE GDDVDVDGDD GDPFFILTSS KSNKNKLRFP PKFVALARID TRETITLENY  180
DGSEKEISVQ SDKKSKSTSY YVTAGWKEFQ RSNDISEGDK CVFKFITSED KICLAKITKK  240
KTPARPLPPA AEAPVTEVDT DDVGDDDDMD DMDVEDDNDK DEDEDFELVD EDDPFFVVTI  300
TPTHNHVLGW KDFMQGTNMS EGDKCMFKFI TSEDKLCLAK ITKPPPWLTP REAKGKAETL  360
ETEVNDDDDD KDEYENENED VEPVDVDPFF VATITTGHKS RLVRC