PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc026827.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 814aa MW: 94135.6 Da PI: 9.5086

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc026827.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	59.6	1e-18	76	172	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrng.eit.krtfvCskegkreeekkk...tekerrtraetrtgCkaklkvkkek..dgkwevtkl 81 ++Y++YAk++GF+vr +++ sk+n+ +i + fvCskeg++ k +++++r+ +++rt+Cka ++v+ ++ + + +++ Cse_sc026827.1_g010.1 76 QYYKDYAKRAGFEVRLGQQYISKKNKdKILdLKYFVCSKEGTNPAPKAGalkKKSNSRKVSSKRTDCKAVFRVRXRHipGKGYWCYDF 163 69***************9995554134415789***99888777767778888899***********99888999* PP FAR1 82 eleHnHela 90 ++ HnH+l+ Cse_sc026827.1_g010.1 164 VEGHNHSLV 172 *******97 PP

Sequence ? help Back to Top
Protein Sequence Length: 814 aa Download sequence
MNRKVGDGVE GGYDDKSSVN LIKIGEFSRL NRCVMAIVDA HQFNQVEGCK IWVPDIPVGQ 60 KPAYGMMYHS LEHAYQYYKD YAKRAGFEVR LGQQYISKKN KDKILDLKYF VCSKEGTNPA 120 PKAGALKKKS NSRKVSSKRT DCKAVFRVRX RHIPGKGYWC YDFVEGHNHS LVSEEDSVFL 180 VSSREVTYTQ QVFLYQASQV NLGPVKGFNL LRQIYGDYDF IGASLVDCKN YRRDVLDFIG 240 KNDAQMLVEM LMNKKDFLPN FSFEYQTGDN NALTNLFWAD EYAKRNYYAF GDVMSFDATF 300 RTNKYKMVFV PFTGIDNHNH CVTFGAALLS SETKESYIWL LQCFKRAFVR APKVIVTDQD 360 GSMKFAIESV FPLSRHRLCM WHIIQKLTSK VGPVLAKNLT FKRRISDIVW TDRIEPKEFE 420 NLWERLLVDF DLKGHKWLSD MYNLRQKWIP AYYRDEPMSG LMRTSSRSES ENNAYGRLTS 480 IDLTLWEFYN HFDSVVGCQR FSQRKNDHDS RYTIPDMHTE LDLEQEASEL YTRSIFLDVQ 540 TEIYASVISF IYSDDSGKKY VIQDTGEDEQ ISRRRRQVEG VVNEVFYEVL CKPAEDFYQC 600 TCKRFESYGL LCRHIFYVLR LSKVKKFPKK YVLRRWSKDS LPPASVIQAT GDSPDMILRE 660 IFRAVEYCVN RYADDPELLQ KFRDHQVQLM AKADADVPIP KKTNKRDRLA SILGVSQPVE 720 TIVNVPKQVS TKGSRKRIKS SLERSVNPSG KSRKNCRYCK CSMKDHDQAK CNAIRAEIAT 780 KKASDKAAIK ESKQKAKLAA KKAKLSDMNA CVVT

Sequence ? help Back to Top

Protein Sequence Length: 814 aa Download sequence

MNRKVGDGVE GGYDDKSSVN LIKIGEFSRL NRCVMAIVDA HQFNQVEGCK IWVPDIPVGQ  60
KPAYGMMYHS LEHAYQYYKD YAKRAGFEVR LGQQYISKKN KDKILDLKYF VCSKEGTNPA  120
PKAGALKKKS NSRKVSSKRT DCKAVFRVRX RHIPGKGYWC YDFVEGHNHS LVSEEDSVFL  180
VSSREVTYTQ QVFLYQASQV NLGPVKGFNL LRQIYGDYDF IGASLVDCKN YRRDVLDFIG  240
KNDAQMLVEM LMNKKDFLPN FSFEYQTGDN NALTNLFWAD EYAKRNYYAF GDVMSFDATF  300
RTNKYKMVFV PFTGIDNHNH CVTFGAALLS SETKESYIWL LQCFKRAFVR APKVIVTDQD  360
GSMKFAIESV FPLSRHRLCM WHIIQKLTSK VGPVLAKNLT FKRRISDIVW TDRIEPKEFE  420
NLWERLLVDF DLKGHKWLSD MYNLRQKWIP AYYRDEPMSG LMRTSSRSES ENNAYGRLTS  480
IDLTLWEFYN HFDSVVGCQR FSQRKNDHDS RYTIPDMHTE LDLEQEASEL YTRSIFLDVQ  540
TEIYASVISF IYSDDSGKKY VIQDTGEDEQ ISRRRRQVEG VVNEVFYEVL CKPAEDFYQC  600
TCKRFESYGL LCRHIFYVLR LSKVKKFPKK YVLRRWSKDS LPPASVIQAT GDSPDMILRE  660
IFRAVEYCVN RYADDPELLQ KFRDHQVQLM AKADADVPIP KKTNKRDRLA SILGVSQPVE  720
TIVNVPKQVS TKGSRKRIKS SLERSVNPSG KSRKNCRYCK CSMKDHDQAK CNAIRAEIAT  780
KKASDKAAIK ESKQKAKLAA KKAKLSDMNA CVVT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	700	706	PKKTNKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	4e-86	FAR1 family protein