PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc026741.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

G2-like

Protein Properties

Length: 557aa MW: 61281.1 Da PI: 5.5822

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc026741.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	95.5	4.1e-30	104	157	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 +prl+Wtp+LH+rFv+av++L G+++A+Pkti++lm+v+gLt+e+v+SHLQkYRl Cse_sc026741.1_g020.1 104 RPRLVWTPQLHKRFVDAVAHL-GIKNAVPKTIMQLMSVDGLTRENVASHLQKYRL 157 59*****************.******************************8 PP
2	Myb_DNA-binding	46.9	6.1e-15	106	156	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r+ WT+++++++vdav+ lG + +ktI++ m g+t++++ s++qky+ Cse_sc026741.1_g020.1 106 RLVWTPQLHKRFVDAVAHLGIKnaVPKTIMQLMSvDGLTRENVASHLQKYR 156 789*****************9*************************7 PP
3	G2-like	79.6	3.8e-25	477	529	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 p l W peLH+rFv+av++L G+++A+Pkti+++m+v+gLt+e+v+ HLQ YRl Cse_sc026741.1_g020.1 477 PSLLWIPELHKRFVDAVAHL-GIKNAVPKTIMQFMSVDGLTRENVAGHLQNYRL 529 6789**************.******************************8 PP
4	Myb_DNA-binding	34.2	5.8e-11	481	528	4	48
S-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 4 WTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 W +e+++++vdav+ lG + +ktI++ m g+t++++ ++q+y+ Cse_sc026741.1_g020.1 481 WIPELHKRFVDAVAHLGIKnaVPKTIMQFMSvDGLTRENVAGHLQNYR 528 99***************9*************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 557 aa Download sequence
MKEVESSNWL ISSSSSSNEL PNPEDLIPLS QTLITPDLAL AFNITNHLNN NNNLNNNNNI 60 NNNLNYLNNP QAVSTPSSQP NSNEFDSSEL GTGDNGEPAR TLKRPRLVWT PQLHKRFVDA 120 VAHLGIKNAV PKTIMQLMSV DGLTRENVAS HLQKYRLYLK RMQGLSGSGN GGGYGSGSGG 180 DSATDRLFAS SPVPPHFLHQ NYDGMMPYMP VAVLQQQQQQ QMGLGVGVVG GHGHFNRHFG 240 SGIMSREMSQ GVHRVGNPVH GSYVDDLENG KEKKALTLFP VAAMSETPTN PDQENTPQPP 300 KTLESSKSVQ DNENPDQDLE EEEEEGECPF CAYMKGGECR EAFINWEKCV EEGENNGEDI 360 VEKCVQATSA LTKCMEANQD YYAPILQAEK MAEQQVLTHG DHNEAATFVW TPLLNKLFVG 420 AVANLGVKNV IPETLLALMG GKLYKMLVVI GKSISFIWEE WRVLVIMGEP ARTLKRPSLL 480 WIPELHKRFV DAVAHLGIKN AVPKTIMQFM SVDGLTRENV AGHLQNYRLY LKRMQGFSGS 540 SGDPSADSLF ASSPVPL

Sequence ? help Back to Top

Protein Sequence Length: 557 aa Download sequence

MKEVESSNWL ISSSSSSNEL PNPEDLIPLS QTLITPDLAL AFNITNHLNN NNNLNNNNNI  60
NNNLNYLNNP QAVSTPSSQP NSNEFDSSEL GTGDNGEPAR TLKRPRLVWT PQLHKRFVDA  120
VAHLGIKNAV PKTIMQLMSV DGLTRENVAS HLQKYRLYLK RMQGLSGSGN GGGYGSGSGG  180
DSATDRLFAS SPVPPHFLHQ NYDGMMPYMP VAVLQQQQQQ QMGLGVGVVG GHGHFNRHFG  240
SGIMSREMSQ GVHRVGNPVH GSYVDDLENG KEKKALTLFP VAAMSETPTN PDQENTPQPP  300
KTLESSKSVQ DNENPDQDLE EEEEEGECPF CAYMKGGECR EAFINWEKCV EEGENNGEDI  360
VEKCVQATSA LTKCMEANQD YYAPILQAEK MAEQQVLTHG DHNEAATFVW TPLLNKLFVG  420
AVANLGVKNV IPETLLALMG GKLYKMLVVI GKSISFIWEE WRVLVIMGEP ARTLKRPSLL  480
WIPELHKRFV DAVAHLGIKN AVPKTIMQFM SVDGLTRENV AGHLQNYRLY LKRMQGFSGS  540
SGDPSADSLF ASSPVPL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10760.1	3e-57	G2-like family protein