PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc026648.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ZF-HD
Protein Properties Length: 272aa    MW: 30067.5 Da    PI: 9.3425
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc026648.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer96.32.5e-3050100359
            ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 
                            +++YkeClkNhAas+GghavDGCgEfmp+      ++++kC+ACgCHRnFHRre+++
  Cse_sc026648.1_g010.1  50 AATYKECLKNHAASIGGHAVDGCGEFMPE------PSSFKCSACGCHRNFHRREPTT 100
                            579*************************8......899***************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    
MEEDLKHHPT HENETPPPHS QSITFLSYPN QKTHTHNNHQ HHHAPPHAPA ATYKECLKNH  60
AASIGGHAVD GCGEFMPEPS SFKCSACGCH RNFHRREPTT TITTTTRPPH FLDFNRPHRP  120
SPSTSPSPLS PPSPQPQPTN IAYGGHLLLS LSTAADPPGT PVAVKVHGRK RFRTKFSQEQ  180
KEKMQNFAEK VGWKMQRCDD KMVTDFCNDI GIKRRIFKVW MHNNKNTLAK KDTTTSRAGA  240
AVNSAENSAL GGGLVRSEDH LQDSTNGSSS SS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15210.18e-46ZF-HD family protein