PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc026435.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

Protein Properties

Length: 711aa MW: 78161.1 Da PI: 6.4042

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc026435.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	60.7	2.4e-19	571	669	2	95
EEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE......EEETTEEEE-TTHHHHHHHHT--TT-EEEE CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliy....rkksgryvltkGWkeFvkangLkegDfvvF 82 +kvl++sdv+++gr+vlpkk ae+h +++++ ++ + +ed ++++W+++++ ++ks++y+l+ ++ +Fvk ngL+egDf+v+ Cse_sc026435.1_g010.1 571 QKVLKQSDVGSLGRIVLPKKEAESHlpDLESRDGISIAMEDiGTSQVWNMRYSLrfwpNNKSRMYLLE-NTGDFVKVNGLQEGDFIVL 657 79***********************9999999***7777***7778888888888887.***************** PP EE-SS.SEE..EEE CS B3 83 kldgr.sefelvvk 95 + ++ ++++++++ Cse_sc026435.1_g010.1 658 Y--SDvKCGKYLIR 669 *..55599988776 PP

Sequence ? help Back to Top
Protein Sequence Length: 711 aa Download sequence
MFPKEEKKVV VDEMETMMTS TDDQRGIWEI DVRAPQQNLL HEMNDTSSMF YNDQFPTIPD 60 FPCMSSSSSS SSNPAPAKPI SSACTTSSTS SASSTSSASS WAVLKSEYVT EEEGEVPVVV 120 PQLETAADGS GSGSINCMDV MENFGYMDLI DGNEIWDPSS IFEEDPGFQG QDGACFNGRG 180 NSNGSEVVQE GEMMENGKLD DLGVMFFDWL KSNKEVISAE DMRNIKLKRS TIECASKRLG 240 SSKEGKKQLL KLILEWVQQS QLQRKNSGGV AGAVGEFSAT DATTTSATQY PLQQYQGLPP 300 APPQAPIATT PTQPPPFNCN TWVPPSDLWI PPTVGYPSYM TDQTANGMAL VGSVPPQTPY 360 PYTGGGGDNY MNPYNNTGSG EYQLLESAPS WNPSQITMAG SPYNNQFLDV GNNYGPQVMP 420 LAPGYPDQYQ YNPQVYAPGG GGGSEQRVMR LGSSATKEAR KKRMARQRKT YFNHHHHSRQ 480 NQHNHMASGD HHQHAHGMLV DDNCSGKSHG GNWLYWPSPQ SATTLPPPPM EVSHRPSARP 540 QQSENRLVKQ TSSSDKRQGL KTEKNLKFLL QKVLKQSDVG SLGRIVLPKK EAESHLPDLE 600 SRDGISIAME DIGTSQVWNM RYSLRFWPNN KSRMYLLENT GDFVKVNGLQ EGDFIVLYSD 660 VKCGKYLIRG VKVRQSASGK LESKKPVKRS YRSTTQPGRS SSSSPANITA I

Sequence ? help Back to Top

Protein Sequence Length: 711 aa Download sequence

MFPKEEKKVV VDEMETMMTS TDDQRGIWEI DVRAPQQNLL HEMNDTSSMF YNDQFPTIPD  60
FPCMSSSSSS SSNPAPAKPI SSACTTSSTS SASSTSSASS WAVLKSEYVT EEEGEVPVVV  120
PQLETAADGS GSGSINCMDV MENFGYMDLI DGNEIWDPSS IFEEDPGFQG QDGACFNGRG  180
NSNGSEVVQE GEMMENGKLD DLGVMFFDWL KSNKEVISAE DMRNIKLKRS TIECASKRLG  240
SSKEGKKQLL KLILEWVQQS QLQRKNSGGV AGAVGEFSAT DATTTSATQY PLQQYQGLPP  300
APPQAPIATT PTQPPPFNCN TWVPPSDLWI PPTVGYPSYM TDQTANGMAL VGSVPPQTPY  360
PYTGGGGDNY MNPYNNTGSG EYQLLESAPS WNPSQITMAG SPYNNQFLDV GNNYGPQVMP  420
LAPGYPDQYQ YNPQVYAPGG GGGSEQRVMR LGSSATKEAR KKRMARQRKT YFNHHHHSRQ  480
NQHNHMASGD HHQHAHGMLV DDNCSGKSHG GNWLYWPSPQ SATTLPPPPM EVSHRPSARP  540
QQSENRLVKQ TSSSDKRQGL KTEKNLKFLL QKVLKQSDVG SLGRIVLPKK EAESHLPDLE  600
SRDGISIAME DIGTSQVWNM RYSLRFWPNN KSRMYLLENT GDFVKVNGLQ EGDFIVLYSD  660
VKCGKYLIRG VKVRQSASGK LESKKPVKRS YRSTTQPGRS SSSSPANITA I

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24650.1	5e-83	B3 family protein