PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc026170.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 309aa    MW: 35045.5 Da    PI: 4.6766
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc026170.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR165.21.8e-2096191190
                   FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevtkl 81 
                            k+Y++YA+++GFsvr s++++  ++g + ++ +vC+keg ++  +k+      +e++ rt++ +rtgC a++k k+++ + k+e++++
  Cse_sc026170.1_g010.1  96 KMYENYAEKAGFSVRLSTQNTL-KSGLVERKYLVCNKEGLPKGVNKDtmseetSETQIRTSSISRTGCMARVKFKLNSdHTKYELYDF 182
                            68***************99998.7888*************999988888888778888899*****************99******** PP

                   FAR1  82 eleHnHela 90 
                            e++HnH++ 
  Cse_sc026170.1_g010.1 183 EENHNHTFI 191
                            ******986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
MPPPLTRSMT PSFNQSNQRN VIESESESDG DEITDITGSS PENSDISSIH YIKQDDSDIC  60
EEVEVEGGDF HYKPIVDESL KPKIGREYTT IEECIKMYEN YAEKAGFSVR LSTQNTLKSG  120
LVERKYLVCN KEGLPKGVNK DTMSEETSET QIRTSSISRT GCMARVKFKL NSDHTKYELY  180
DFEENHNHTF IPVKSVKEEE KNESQTTNIY MQQLGGTNIG ATRAHHLYAA TNGGYDSVDA  240
TETEFRNNKR GLNSHIGDSD AQMLITKMEN RKKHVENFSF EYVVEDSELT ALEFGDTISF  300
DATFRTNNR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.15e-15FAR1 family protein