PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc026115.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

C2H2

Protein Properties

Length: 528aa MW: 56914.9 Da PI: 6.5198

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc026115.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.7	0.00018	425	447	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg +F+ ++ + +H+ H Cse_sc026115.1_g010.1 425 HQCSICGLRFKLQERFDKHMEWH 447 79******************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 528 aa Download sequence
MEMSRSFDRS VRNPNAVKKP RLEEVPLRGS IANGRKQVGG VVVGVGDGEG YEPQSLSEKF 60 NVVLNLNQSQ YRIALAELTF NSKPIITNLT IIAGENVQAA KAIANAICNQ ILEGLENNFQ 120 KTQRTQDPGL RLDRESLTSL RSKGSPLTDE NGRLGGGRKL LNNTGGLSTS FNGVSTIKPS 180 GLADGKAARS QRQINTGLSS QSQDSFSIRP QQVHKLQLPS PQLPVKHASF LPPYQPEPVS 240 DFSTESPKTT SVSASPLVSS LLARPKSLVE DIPGPPSSSS LLAAVSSIFA NKPITSTSSP 300 THTKPASNNV TNLLSTLVAK GLISASENDQ SLSGPTPTSQ KVDQPLSGPT PSSQKVSPVV 360 ASSLLSTPST SSELTPSKPV IKSAVAIPPS IDEDIKCLIG FDFKANVIRE FHPSVISDLI 420 DDLPHQCSIC GLRFKLQERF DKHMEWHTLK NSESNTSRSW FSNCDEWVNG PNNESVFEIN 480 GEQMVTADES QIVCVLCGEM FDDYYSPERK HSLSDLGLAN DVKVENDV

Sequence ? help Back to Top

Protein Sequence Length: 528 aa Download sequence

MEMSRSFDRS VRNPNAVKKP RLEEVPLRGS IANGRKQVGG VVVGVGDGEG YEPQSLSEKF  60
NVVLNLNQSQ YRIALAELTF NSKPIITNLT IIAGENVQAA KAIANAICNQ ILEGLENNFQ  120
KTQRTQDPGL RLDRESLTSL RSKGSPLTDE NGRLGGGRKL LNNTGGLSTS FNGVSTIKPS  180
GLADGKAARS QRQINTGLSS QSQDSFSIRP QQVHKLQLPS PQLPVKHASF LPPYQPEPVS  240
DFSTESPKTT SVSASPLVSS LLARPKSLVE DIPGPPSSSS LLAAVSSIFA NKPITSTSSP  300
THTKPASNNV TNLLSTLVAK GLISASENDQ SLSGPTPTSQ KVDQPLSGPT PSSQKVSPVV  360
ASSLLSTPST SSELTPSKPV IKSAVAIPPS IDEDIKCLIG FDFKANVIRE FHPSVISDLI  420
DDLPHQCSIC GLRFKLQERF DKHMEWHTLK NSESNTSRSW FSNCDEWVNG PNNESVFEIN  480
GEQMVTADES QIVCVLCGEM FDDYYSPERK HSLSDLGLAN DVKVENDV