PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc026072.1_g030.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | bHLH | ||||||||
Protein Properties | Length: 234aa MW: 26133.2 Da PI: 10.1681 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 24.1 | 6.7e-08 | 126 | 166 | 9 | 54 |
HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 r RR+ri +++ L++l+P +K++ a++L +A +Y+k L Cse_sc026072.1_g030.1 126 ARHRRERISERIRILQRLVPGG-----TKMDTASMLDEAAHYMKFL 166 699*****************87.....8****************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 234 aa Download sequence |
MELMPMMMEL DELPEQFPLP FHDLSDSPLV EFTGASSTTN HHTPSQHGHL MYRTPPPVII 60 PSVHVRALRE FPRGSWFQQK PDSVEAMREM IFRMAALQPV QIDPESVKAP KRRNVKISKD 120 PQSVAARHRR ERISERIRIL QRLVPGGTKM DTASMLDEAA HYMKFLKKQV QTLEQAAATS 180 GGVGAMPTKT SAPVPPPGFN VVTMNNHGTN NQSNLVRACG QPASHMIGSM ELLR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G50330.1 | 1e-38 | bHLH family protein |