PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc026045.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family GRAS
Protein Properties Length: 529aa    MW: 58071.6 Da    PI: 4.5823
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc026045.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS441.94.4e-1351605271374
                   GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevs 88 
                            lv++L++cAeav+ +++ la++l+++   la  ++ +m+++a+yf+eALa+r+++        l+p++ ++ + + + +    f+e++
  Cse_sc026045.1_g020.1 160 LVHTLMACAEAVEGNNMLLAENLVKQAGMLAVAQAGAMRKVATYFAEALARRIYK--------LSPENPQD-TPAFQDFLEMHFYETC 238
                            689****************************************************........33333322.22233333345***** PP

                   GRAS  89 PilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpf 176
                            P++kf+h+taNqaIle++ g+++vH+iDf+++qG+QWpaL+qaLa Rp+gpp +R+Tg+g p+++ k+ l+e+g++La++A++++v+f
  Cse_sc026045.1_g020.1 239 PYIKFAHFTANQAILESFVGKKKVHVIDFSMKQGMQWPALMQALALRPGGPPVFRLTGIGLPSNDGKDHLQEVGWKLAQLADTINVEF 326
                            **************************************************************************************** PP

                   GRAS 177 efnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyy 264
                            e++ +va++l+dle+ +++++ +E++aVn+v++lhrll +++++e+    vL++vk+l+P +++vveqea+hn+  Fl+rf+e+l+yy
  Cse_sc026045.1_g020.1 327 EYRGFVANSLADLEPGMFDLRDDEVVAVNSVFELHRLLGRPMAVEK----VLDVVKGLNPVILTVVEQEANHNGLVFLDRFTESLHYY 410
                            **************************************99999999....************************************** PP

                   GRAS 265 salfdsleak......lpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk. 345
                            s+lfdsle++         +se+++ +++++lg++i+nvvaceg +r+erhetl +W+ rl++aGF++v+l+++a kqa++ll+ ++ 
  Cse_sc026045.1_g020.1 411 STLFDSLESSgggsggGEGASEQDKIMSEVYLGKQICNVVACEGMDRVERHETLTQWKTRLDSAGFEAVHLGSNAFKQASMLLALFAg 498
                            *******9885666544445699***************************************************************** PP

                   GRAS 346 sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                            +dgyrvee++g+l+lgW++rpL+++SaW+
  Cse_sc026045.1_g020.1 499 GDGYRVEENNGCLMLGWHTRPLITTSAWK 527
                            ****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 529 aa     Download sequence    
MRNHTLASTS KGKNIYDQDD ELLAVLGYNV KSGDMVDVAS KIEHLEGVLN NDDGLSQYAS  60
DTNHLNPSDL NSWLESMISE LNPMMGSEQD LGTVAGFYSQ TEKVKDWSTP ENLAGEMELS  120
SSPDPPPSGS GSSAYPEIQN PNPNPNQIVI VDSQENGIRL VHTLMACAEA VEGNNMLLAE  180
NLVKQAGMLA VAQAGAMRKV ATYFAEALAR RIYKLSPENP QDTPAFQDFL EMHFYETCPY  240
IKFAHFTANQ AILESFVGKK KVHVIDFSMK QGMQWPALMQ ALALRPGGPP VFRLTGIGLP  300
SNDGKDHLQE VGWKLAQLAD TINVEFEYRG FVANSLADLE PGMFDLRDDE VVAVNSVFEL  360
HRLLGRPMAV EKVLDVVKGL NPVILTVVEQ EANHNGLVFL DRFTESLHYY STLFDSLESS  420
GGGSGGGEGA SEQDKIMSEV YLGKQICNVV ACEGMDRVER HETLTQWKTR LDSAGFEAVH  480
LGSNAFKQAS MLLALFAGGD GYRVEENNGC LMLGWHTRPL ITTSAWKLK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01570.10.0GRAS family protein