PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc026036.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

Trihelix

Protein Properties

Length: 801aa MW: 91406.6 Da PI: 4.6551

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc026036.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	35.7	2.2e-11	413	501	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrer.gferspkqCkekwenlnkrykkikegekkr..tsessstcpyfdql 85 +W+++ + +L+e+ ++ +l+r++l++ +W ev++k++e ++e++ qC+ ++e l+++ykk+k+ +++ + ++ +f+++ Cse_sc026036.1_g010.1 413 EWSENATFVLLEVWGDRYMQLGRRSLRGEDWVEVAEKISEMcKMEINDGQCRTRFETLKQKYKKEKAKMEGSgmGHGYYGKWGFFKKM 500 5***********************************775378*******************98776652335666789999998 PP trihelix 86 e 86 + Cse_sc026036.1_g010.1 501 D 501 7 PP

Sequence ? help Back to Top
Protein Sequence Length: 801 aa Download sequence
MEKRVKDVVD SLEMGIDDDV WMIGIKGMGG AGKTTTARAD VVDSLEMGID DDVWMIGIKG 60 MGGAGKTTTA RAVFDRLSSN FEAKSFVANV REVSEPSMSG LKKLQEQILS RVLNEQVILD 120 SVDDGINMMQ ERMRAIKVLL VLDDVNDIDQ LVAMRAIKVL LVLDDVNDID QLVALAGVSS 180 SCREGQLWIA IRYTTHTPKS SPPTLTLHYN TWPVLSNPCP VPHSQPTNSI PQKVVEAATK 240 AAELSEQRSE FSTLHEEWLK SVLAMSRVDD HKLEGDDKDD VFDELFCLWH ELKCSNKKLI 300 TRRPIRNNNY TNNNYNDYDN DNDFEPPESP LAPPINNRFN YHQHQHVNIV NDDSDNSLDD 360 DDINNNNNNN EYQQQYYNVG ETSTRRHQKK RRLENLVGGY GYAPPRVNNV MDEWSENATF 420 VLLEVWGDRY MQLGRRSLRG EDWVEVAEKI SEMCKMEIND GQCRTRFETL KQKYKKEKAK 480 MEGSGMGHGY YGKWGFFKKM DMLLSPKRQH NGLPCGVDSG EYVFMNMKVY LNQSNALDEM 540 RDSPGESEVD EDEDEDEEDG DGDELNEEDE EGFKLLAESV QNFGEIYEKI EGRKRQQMLE 600 LEKMRMDFQR ELELQKKVIL ERAQAEIAKI REEDDEDANS VFRHLVEKVN CGLVFATHYY 660 SLTKEFAAHP HVTLQHMACA FKSISNTSQS TNQQLVFLYR LTNGACPESY GMQVALMAGI 720 PQKVVEAATK AAEVMKTKIG VSFRSSEQRS EFSTLHEEWL KSVLAMSKVD DHKLEGGDED 780 DVFDELFCLW HELKCSNKKL V

Sequence ? help Back to Top

Protein Sequence Length: 801 aa Download sequence

MEKRVKDVVD SLEMGIDDDV WMIGIKGMGG AGKTTTARAD VVDSLEMGID DDVWMIGIKG  60
MGGAGKTTTA RAVFDRLSSN FEAKSFVANV REVSEPSMSG LKKLQEQILS RVLNEQVILD  120
SVDDGINMMQ ERMRAIKVLL VLDDVNDIDQ LVAMRAIKVL LVLDDVNDID QLVALAGVSS  180
SCREGQLWIA IRYTTHTPKS SPPTLTLHYN TWPVLSNPCP VPHSQPTNSI PQKVVEAATK  240
AAELSEQRSE FSTLHEEWLK SVLAMSRVDD HKLEGDDKDD VFDELFCLWH ELKCSNKKLI  300
TRRPIRNNNY TNNNYNDYDN DNDFEPPESP LAPPINNRFN YHQHQHVNIV NDDSDNSLDD  360
DDINNNNNNN EYQQQYYNVG ETSTRRHQKK RRLENLVGGY GYAPPRVNNV MDEWSENATF  420
VLLEVWGDRY MQLGRRSLRG EDWVEVAEKI SEMCKMEIND GQCRTRFETL KQKYKKEKAK  480
MEGSGMGHGY YGKWGFFKKM DMLLSPKRQH NGLPCGVDSG EYVFMNMKVY LNQSNALDEM  540
RDSPGESEVD EDEDEDEEDG DGDELNEEDE EGFKLLAESV QNFGEIYEKI EGRKRQQMLE  600
LEKMRMDFQR ELELQKKVIL ERAQAEIAKI REEDDEDANS VFRHLVEKVN CGLVFATHYY  660
SLTKEFAAHP HVTLQHMACA FKSISNTSQS TNQQLVFLYR LTNGACPESY GMQVALMAGI  720
PQKVVEAATK AAEVMKTKIG VSFRSSEQRS EFSTLHEEWL KSVLAMSKVD DHKLEGGDED  780
DVFDELFCLW HELKCSNKKL V

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24490.1	2e-70	Trihelix family protein