PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc026027.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

bHLH

Protein Properties

Length: 311aa MW: 35125.1 Da PI: 8.4622

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc026027.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.9	1.5e-12	137	183	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h ++Er+RR+++ ++f L l+P + kK++Ka++L A++Y+k+Lq Cse_sc026027.1_g030.1 137 DHIMAERKRREKLSQKFIALSALIPGL-----KKMDKASVLGDAIKYLKNLQ 183 699**********************.....9****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 311 aa Download sequence
MEITQFRGFS ELSGIEDPCF NSQWPLNSFD DQLMNMDACN SFAYAPMFDH IHYKPIMEPS 60 PRPSKQLKTS SWNSSQTIHY GSDHSHIANQ AATIMSPKEE TTLSSSSVFQ SSSHVQFGNQ 120 NHHAKKINTS KFTTPQDHIM AERKRREKLS QKFIALSALI PGLKKMDKAS VLGDAIKYLK 180 NLQEKVKTLE EQSKKRSNVE SVVFVKRYEV LGDGGEISSS SKNSQDQLPE IEARFSGKDV 240 LIRVHCEKKA GIVEEILAEV EKLHLSVINT SALTFANYAL DITVVATMDQ EFTMTMKDLV 300 KNLRIGLKRF M

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	142	147	ERKRRE
2	143	148	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37850.1	1e-58	bHLH family protein