PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc025806.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 858aa MW: 100836 Da PI: 8.3563

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc025806.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	28.7	4.4e-09	23	98	10	90
FAR1 10 vGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +GF ++k+++k++ ng++++ +++C+k+g e + + +r++++++ +C +l+ k + + +w + HnHel Cse_sc025806.1_g030.1 23 LGFVIVKKRTKSE--NGQMMEINYMCTKSGIYEYHGSG----KRKTKTKKSNCPFRLVAKYRPaRYNWILRVKCDSHNHELL 98 6999998876665..999*************98877....899999**********988999999889****96 PP

Sequence ? help Back to Top
Protein Sequence Length: 858 aa Download sequence
MYFQAFRSHE EVTEWVQNIV SGLGFVIVKK RTKSENGQMM EINYMCTKSG IYEYHGSGKR 60 KTKTKKSNCP FRLVAKYRPA RYNWILRVKC DSHNHELLES LHGVSYAMRL KDDELSLVRE 120 LSEYSVRPRN ILSTIKGRNP DNVSSVRTIY NALDKFRRAR VGDRTQIQVL YSHLTDSGYA 180 YYPRVNEHNE LEELFFVHPN SNALWRTFPK IMLMDSTYNT TMFKLPLLEI LGVTPTNKTF 240 SMAYSFIHGE KGHNFQWVLQ RVKEVIDERY YPRVIVTDRD LALVGACRAE FPTAHKLLCR 300 WHIEQNLLKF MRNRCSGIDE YDSIKRRWDR LVKAPTSRLF EKQYERLQQR LVNHAPIAEY 360 LDNWLRDYRH MFVSYITDEY RSFGQTTTCR VEAHHALLKL YLGGTQSNLD RLLSAIDKIV 420 FAQENSIKES FNRSIGEKIN DCNILLFQEL WYKVSHHAFK LMQKELHLSI TVENCSHKLR 480 TIYGLPFFHE MQYYVYHGRP IPLEEVNIFW RTLHVPWPNI NRPPPEDGSS SNDDDDDDDD 540 DHHHHDDTSF RDDIRQFKNV FTKASSFVKK NMITKLRSIY QPASDDTREP VIQKNTRGRP 600 SAKDKMGKAT QVPDLNEDPD LNEVPTVDYR RSTTTRSTQV PNFNKEPARH SSFTGPSDHR 660 RSTAIRHRLY DGDAESEMLM SMLPVLWHPY IISIYNVMGD GNCGFRCVAH GVWEQQDLWR 720 QVRQMLLQQM DLHWQVYMGL WGEDGFNELR RTIDWSGHGN APPDRYMDMP NTGLPGTNDY 780 GCRYFSWKDE FERRYLSRAS SSTQCSNCVA KDNEIKLLKT RIKTLEMELE LTRNPEDHAC 840 QSGARLNDLL NEMNNLHI

Sequence ? help Back to Top

Protein Sequence Length: 858 aa Download sequence

MYFQAFRSHE EVTEWVQNIV SGLGFVIVKK RTKSENGQMM EINYMCTKSG IYEYHGSGKR  60
KTKTKKSNCP FRLVAKYRPA RYNWILRVKC DSHNHELLES LHGVSYAMRL KDDELSLVRE  120
LSEYSVRPRN ILSTIKGRNP DNVSSVRTIY NALDKFRRAR VGDRTQIQVL YSHLTDSGYA  180
YYPRVNEHNE LEELFFVHPN SNALWRTFPK IMLMDSTYNT TMFKLPLLEI LGVTPTNKTF  240
SMAYSFIHGE KGHNFQWVLQ RVKEVIDERY YPRVIVTDRD LALVGACRAE FPTAHKLLCR  300
WHIEQNLLKF MRNRCSGIDE YDSIKRRWDR LVKAPTSRLF EKQYERLQQR LVNHAPIAEY  360
LDNWLRDYRH MFVSYITDEY RSFGQTTTCR VEAHHALLKL YLGGTQSNLD RLLSAIDKIV  420
FAQENSIKES FNRSIGEKIN DCNILLFQEL WYKVSHHAFK LMQKELHLSI TVENCSHKLR  480
TIYGLPFFHE MQYYVYHGRP IPLEEVNIFW RTLHVPWPNI NRPPPEDGSS SNDDDDDDDD  540
DHHHHDDTSF RDDIRQFKNV FTKASSFVKK NMITKLRSIY QPASDDTREP VIQKNTRGRP  600
SAKDKMGKAT QVPDLNEDPD LNEVPTVDYR RSTTTRSTQV PNFNKEPARH SSFTGPSDHR  660
RSTAIRHRLY DGDAESEMLM SMLPVLWHPY IISIYNVMGD GNCGFRCVAH GVWEQQDLWR  720
QVRQMLLQQM DLHWQVYMGL WGEDGFNELR RTIDWSGHGN APPDRYMDMP NTGLPGTNDY  780
GCRYFSWKDE FERRYLSRAS SSTQCSNCVA KDNEIKLLKT RIKTLEMELE LTRNPEDHAC  840
QSGARLNDLL NEMNNLHI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	9e-14	FAR1 family protein