PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc025769.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 330aa MW: 38099.8 Da PI: 7.6728

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc025769.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	34	9.4e-11	94	183	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHn 86 ++Y eYA ++ Fs+rks sk++ +ge+t++ vC++ gk+ ++ k t + ++++ ++ + k + k + ++ +++++++++Hn Cse_sc025769.1_g010.1 94 DMYLEYALKARFSIRKSISKRK--KGEVTHKYIVCNRAGKSWKTIVKdTLAQGSQTVDNQKDGGNKPRFKAIHgTSSFKLYEFVENHN 179 58*************99887..999*********98887664334444555555556667777777779********* PP FAR1 87 Hela 90 H+l Cse_sc025769.1_g010.1 180 HPLL 183 95 PP

Sequence ? help Back to Top
Protein Sequence Length: 330 aa Download sequence
MDSTIGNYDQ EDTDVPVVSL MQTEANVSIQ SPINDEHVNS NEDVSTEYSD LDDSETDDEC 60 IPTPKGHKYW IPEVPADEKP SEGNVFDTFD EAYDMYLEYA LKARFSIRKS ISKRKKGEVT 120 HKYIVCNRAG KSWKTIVKDT LAQGSQTVDN QKDGGNKPRF KAIHGTSSFK LYEFVENHNH 180 PLLDENNTDL LKVRRKLDFS DKLFIHRASV SNLGPTKAHR LRVEFMGGYQ KVRGKPSDWK 240 NFRRSVKKYI GPRDAQMLVD KMNDRKKHIC GEVDLDSEFK KLFHKLIWDV YIEPSEFEDR 300 YHAHIGKSTS KRKKCEINHK YLLCSGAEKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	1e-07	FAR1 family protein