PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc025503.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family GRAS
Protein Properties Length: 529aa    MW: 60385.2 Da    PI: 5.8437
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc025503.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS330.63.1e-1011525273374
                   GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPi 90 
                            ++Ll++A+av++++ ++ q+l++ l+el+sp+gd+ q+l +yf++AL +r+++ +++ y++l++ +++  + +++ + +  f+evsP+
  Cse_sc025503.1_g010.1 152 DVLLDAARAVADKNSSRLQQLMWMLNELSSPYGDTDQKLSSYFLQALFSRMTDAGDRSYRTLSSASDKMCSFESTRKLVLKFQEVSPW 239
                            689*********************************************************999988874443333344444******* PP

                   GRAS  91 lkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg.....skeeleetgerLakfAeelg 173
                             +f+h+++N aI+ea+ege ++HiiD + ++++QWp+Ll+a+a+R++++p+lR+T+++  +++      ++ ++e+g r++kfA+ +g
  Cse_sc025503.1_g010.1 240 TTFGHVACNGAIMEALEGEAKLHIIDVSNTYCTQWPTLLEAIATRTDETPHLRLTTIVVTKQNgdvsgVQKVMREIGTRMEKFARLMG 327
                            ********************************************************999777789999999***************** PP

                   GRAS 174 vpfefnvlvak.rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnse....sFler 256
                            vpf+fnv++++ +l+dl+l+ L+++ +Eala+nl  +  ++       +++rd +L++++sl+Pk+++vv++ead + +    +F+++
  Cse_sc025503.1_g010.1 328 VPFKFNVIHHTgDLSDLNLSLLHIQDDEALAINLNGSFRSVI------NNRRDYLLSTFRSLNPKIITVVDEEADFSYGtegfEFVRG 409
                            ********8878************************888886......8889*********************987443346799*** PP

                   GRAS 257 flealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkv 344
                            f e+l+++ + f++l+++++++s+er ++Er+  gr+i+++vac+ +e+ er+e + +W++r+++ GF pv++s+++ +++++llr++
  Cse_sc025503.1_g010.1 410 FQECLRWFRVYFEALDESFSKTSNERLMLERA-AGRAIMDLVACSPNESMERREIAPRWSSRFHANGFIPVSYSDEVCDDVRALLRRY 496
                            ********************************.******************************************************* PP

                   GRAS 345 ksdgyrve..eesgslvlgWkdrpLvsvSaWr 374
                              +g+++   +  + ++l+Wkd p+v++SaW+
  Cse_sc025503.1_g010.1 497 R-EGWSMAppDTAAGMFLTWKDTPVVWASAWK 527
                            *.777777557789999**************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 529 aa     Download sequence    
MDTLFRLVTF QKQHHPHSFN NSTTTTTTNS SSSRSSTQQT PYHFNYQQPQ EQEECFNFFM  60
DEEDYSSSSR HHQNQNQYYS SQQPPYSHQS LSNTPTPTTS ATTTPPPLSH YGFSTSEHQQ  120
SSDPNINYSY SPARDVTMEY SNSFTTNTWA SDVLLDAARA VADKNSSRLQ QLMWMLNELS  180
SPYGDTDQKL SSYFLQALFS RMTDAGDRSY RTLSSASDKM CSFESTRKLV LKFQEVSPWT  240
TFGHVACNGA IMEALEGEAK LHIIDVSNTY CTQWPTLLEA IATRTDETPH LRLTTIVVTK  300
QNGDVSGVQK VMREIGTRME KFARLMGVPF KFNVIHHTGD LSDLNLSLLH IQDDEALAIN  360
LNGSFRSVIN NRRDYLLSTF RSLNPKIITV VDEEADFSYG TEGFEFVRGF QECLRWFRVY  420
FEALDESFSK TSNERLMLER AAGRAIMDLV ACSPNESMER REIAPRWSSR FHANGFIPVS  480
YSDEVCDDVR ALLRRYREGW SMAPPDTAAG MFLTWKDTPV VWASAWKPI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37650.11e-176GRAS family protein