PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc025450.1_g040.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | FAR1 | ||||||||
Protein Properties | Length: 241aa MW: 27677.7 Da PI: 8.9832 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 38.4 | 4e-12 | 78 | 162 | 3 | 89 |
FAR1 3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkekdgkwevtklele 84 Y +YA+++GF vrks +k+ rng ++++ +vC++eg ++ + + ++k++r+ + + tgCka+++ ++ g + Cse_sc025450.1_g040.1 78 YMKYASKAGFVVRKSCQKRL-RNGIVKQKYLVCNREGCPKGIHVDtldlenSDKQKRSLNLHITGCKARVMFELIP-GST------HI 157 99************998887.8999*************999888889998888888999999*********99984.333......33 PP FAR1 85 HnHel 89 HnHel Cse_sc025450.1_g040.1 158 HNHEL 162 55554 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 241 aa Download sequence |
MYFEVTSLRG RLLGFVNPVV KESVTSKLNA LKTHESFSTH SNFDNPGGTL YYIPKVPVDV 60 LLAKGNVYNS VDECISAYMK YASKAGFVVR KSCQKRLRNG IVKQKYLVCN REGCPKGIHV 120 DTLDLENSDK QKRSLNLHIT GCKARVMFEL IPGSTHIHNH ELERKEYKHL SKTERQLTYA 180 EQLFIVKAAC KKHVPDFSFD YLAENAELPA IFWDDEVSKY NYKEFCDVVC FDATYRTNNK 240 K |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G19990.2 | 4e-07 | FAR1 family protein |