PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc025125.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 339aa MW: 38971.1 Da PI: 6.1162

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc025125.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	57.1	6.2e-18	75	155	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 Yn+YA evGF vr+ ++++ g +++++f Cske +++ + k r r+e r++Ckak+ v ++ ++++v+++++eHnH + Cse_sc025125.1_g030.1 75 AYNDYAAEVGFIVRRGHQTND--GGIVINKEFLCSKEVTKKVKAVK-----RVRSEFRINCKAKIYVVRS-GENYRVKSFVEEHNHGV 154 5*************98877..99*********99998776.....9999********999.9************87 PP FAR1 90 a 90 + Cse_sc025125.1_g030.1 155 F 155 6 PP

Sequence ? help Back to Top
Protein Sequence Length: 339 aa Download sequence
MRVVTDSDSM RQNCASNEFV EDENLSADVN VEENEEVNSP DFFTSTSMLI KPVVVKTLVP 60 VEGTLFDSVE EAYNAYNDYA AEVGFIVRRG HQTNDGGIVI NKEFLCSKEV TKKVKAVKRV 120 RSEFRINCKA KIYVVRSGEN YRVKSFVEEH NHGVFTAEDR HLQKSHRFMS LAHQYFAIKA 180 SNLNIGPCMS FNFIAELLGG YENVGATKID FKNMSRDIYS YIGKYDAQMI IDKFSILKER 240 DENFTFEFKT NTDGQLSCFF WSDDTSKRNY EAFGDVLSFD VTYKTNIVDN HKRCVIFACG 300 LLSKEDVVSY KWLLQAFLNT HIKEPYQIYL KLLNTGFIC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-22	FAR1 family protein