PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc024944.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 271aa MW: 30955.8 Da PI: 6.1115

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc024944.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	54.8	3.1e-17	94	171	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 Y++YA e+GF vr+ ++++ g +++++f Cskeg+++ + r r+e rt+Cka++ v ++ +k++v+++ +eHnH + Cse_sc024944.1_g020.1 94 AYKDYAAEAGFIVRRGHQTND--GGIVMNKEFLCSKEGTKKVK--------RIRSEFRTNCKARIYVVRS-GEKYRVKHFAEEHNHGF 170 5*************98877..999********98875........45799*******999.9************98 PP FAR1 90 a 90 + Cse_sc024944.1_g020.1 171 F 171 6 PP

Sequence ? help Back to Top
Protein Sequence Length: 271 aa Download sequence
MELPDQYSRI GPDLSVHFSL KNAVEGDSMR QNFASNEFVE DENLSADVNV EENEEVNSPD 60 FFISTSILIK PVVVKTLVPV EGTLFDSVED AYKAYKDYAA EAGFIVRRGH QTNDGGIVMN 120 KEFLCSKEGT KKVKRIRSEF RTNCKARIYV VRSGEKYRVK HFAEEHNHGF FTAEDRHLQK 180 SHRSMSLAHQ SFAIKASNLN IGPCMSFNFI AELLGGYENV GATKIDFKNM SRDIYSYISK 240 YDAQMIIDKF SILKERDENF TFEFKTNTDG Q

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-13	FAR1 family protein