PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc024910.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 661aa MW: 76126.5 Da PI: 7.2619

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc024910.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	42.3	2.5e-13	59	142	23	90
FAR1 23 krngeitkrtfvCskegkreeekkk................tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +n+ + f+C ++g++ k + ++ +rr+ra+ r+gC+a+l++kk+ dgk+ vtk+ ++HnH+l+ Cse_sc024910.1_g010.1 59 GMNEDPSLKYFYCVRQGFKPVPKPEnsiadksqttnplgvnKVIKRRKRASCRCGCTAQLRLKKRPDGKYFVTKFFEKHNHSLV 142 5566677789******9877766799*******999999**********************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 661 aa Download sequence
MAEHHDEGEP VTPRAVHNEQ FTPGEGYFTP PEHQDGSFQP TPNGTRFWVP KVTTKPKEGM 60 NEDPSLKYFY CVRQGFKPVP KPENSIADKS QTTNPLGVNK VIKRRKRASC RCGCTAQLRL 120 KKRPDGKYFV TKFFEKHNHS LVYQDDIKYL RTNRRLTFTK QQILNQLSNA NIGPVRSWKV 180 LKEMYGGFEN IGATDVECKN YRRGLNDFIG DRDAQMVVDK LLSREEFFTD FSVEYKQDKD 240 TKELIGLFWA DEEAKRNYAA FGDVVSFDAT FLSNRYNMVL APFTGIDNHN RCVIFAAALL 300 ASESAKRYTW LLKRFKKVFI NVPKVVVTDQ DPAMKIAIEK ILPDTRHRLC MWHIMQKLTT 360 KVGPALCSNT DFKRRLCDIV WTDKLEADVF DEQWAAIMED FELADVFDEQ WAAIMEDFEL 420 GEHKWLHDMF EMRSKWIHAY FRHEPMSGLM RTTSRSESEN HFLGQVRQND TSSTYVIRDT 480 EADYKIQGVP VEVTYERRWS KHALPITTVG RSMDVASPSN PVECVNVVLR DIYGSVEDSV 540 TRLVTDIQKL HLYKADLVSL LEQVKLDIPS APEMNKKELY AAALGVTEPP EVNIVAPECR 600 NKGSVSLKRH QTQAEIAIIQ TNKTPRHCSY CDTYGYHDSR NCPKKKQDLE EAMDDSNSVA 660 E

Sequence ? help Back to Top

Protein Sequence Length: 661 aa Download sequence

MAEHHDEGEP VTPRAVHNEQ FTPGEGYFTP PEHQDGSFQP TPNGTRFWVP KVTTKPKEGM  60
NEDPSLKYFY CVRQGFKPVP KPENSIADKS QTTNPLGVNK VIKRRKRASC RCGCTAQLRL  120
KKRPDGKYFV TKFFEKHNHS LVYQDDIKYL RTNRRLTFTK QQILNQLSNA NIGPVRSWKV  180
LKEMYGGFEN IGATDVECKN YRRGLNDFIG DRDAQMVVDK LLSREEFFTD FSVEYKQDKD  240
TKELIGLFWA DEEAKRNYAA FGDVVSFDAT FLSNRYNMVL APFTGIDNHN RCVIFAAALL  300
ASESAKRYTW LLKRFKKVFI NVPKVVVTDQ DPAMKIAIEK ILPDTRHRLC MWHIMQKLTT  360
KVGPALCSNT DFKRRLCDIV WTDKLEADVF DEQWAAIMED FELADVFDEQ WAAIMEDFEL  420
GEHKWLHDMF EMRSKWIHAY FRHEPMSGLM RTTSRSESEN HFLGQVRQND TSSTYVIRDT  480
EADYKIQGVP VEVTYERRWS KHALPITTVG RSMDVASPSN PVECVNVVLR DIYGSVEDSV  540
TRLVTDIQKL HLYKADLVSL LEQVKLDIPS APEMNKKELY AAALGVTEPP EVNIVAPECR  600
NKGSVSLKRH QTQAEIAIIQ TNKTPRHCSY CDTYGYHDSR NCPKKKQDLE EAMDDSNSVA  660
E

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-56	FAR1 family protein