PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc024854.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 802aa MW: 92685 Da PI: 9.2938

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc024854.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	29.9	1.8e-09	340	419	3	90
FAR1 3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 Y++YA+e G v+ +++ +k+++++ +++ ++++ + + +rr+ra++r+gC+akl+++++ ++kw+v+k+ ++ nH l+ Cse_sc024854.1_g020.1 340 YKDYAREGGEGVKPLANNVKKKTNNVQTNE-------SQSHVVN-ELIKRRKRASQRCGCQAKLRIRRTLENKWVVYKFLEKLNHRLV 419 666666666666666555554444222221.......1112222.346799**********************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 802 aa Download sequence
MADYIPLNIQ AEIMKRLPVI SLIQFRSVSK QWKSVIDSPE FIADHCVIQH HTHESQHLLL 60 SYMELGNGDP KSFTHIFTIN MPITSIRDVA GFRKNGGPII VEKKALKENE LIVYEPVSKQ 120 INYTGIAGAF YYFFASPYTQ TLLLLDHKDS VDSETAIGIG KQEMDRGVYE EYTARRNDRL 180 KRKRGESGVE IQTPSKQCLG VRMESAKRTV EVKKYEGARK MTTPLVERRE VATAQRVERR 240 EPVTTQRYSL RSSSKVNKKP PLAMSCERSM DAATVERKTT VSHQLHYHVQ HLVIHDDQSV 300 PQVGSYQPTP EASKFWVPDP KKKPIEGTEF DKIDIALKVY KDYAREGGEG VKPLANNVKK 360 KTNNVQTNES QSHVVNELIK RRKRASQRCG CQAKLRIRRT LENKWVVYKF LEKLNHRLVR 420 EEDYMYLKLL YHLSNANLDP TRAWKVFKEM YGGFENIGVT DVECRNYKRG LNKFIGTRDA 480 QIIVEKLLSR QEFCENFSVE FKQNKADKTL IGLFWADEQA KQYYDTFGDV VSFDATFRSN 540 RYNMVLVPFT GIDNYNRCIL FGATLLASES SKRYTWLLKR FKNFFETTPK VVVTYQDPAM 600 KIAIEEIFLD SRHRPCMWHI MQKLTRKVKY TPSDCSVQCS CLRYECYGLL CSHIFYVMRM 660 RKVDHFPTQY LQSRWSKNAL ILKSVENKKD FATASSSDSV LDYVLREIYK NVEQSVTHLD 720 AQTTLKEKAK MDVPNPPKMN TNPVYAATLG VTEPGKNDIL PPYGTCGKYT NHDSRNCQGL 780 QDDDVADAEP FKGEDMDFYY SD

Sequence ? help Back to Top

Protein Sequence Length: 802 aa Download sequence

MADYIPLNIQ AEIMKRLPVI SLIQFRSVSK QWKSVIDSPE FIADHCVIQH HTHESQHLLL  60
SYMELGNGDP KSFTHIFTIN MPITSIRDVA GFRKNGGPII VEKKALKENE LIVYEPVSKQ  120
INYTGIAGAF YYFFASPYTQ TLLLLDHKDS VDSETAIGIG KQEMDRGVYE EYTARRNDRL  180
KRKRGESGVE IQTPSKQCLG VRMESAKRTV EVKKYEGARK MTTPLVERRE VATAQRVERR  240
EPVTTQRYSL RSSSKVNKKP PLAMSCERSM DAATVERKTT VSHQLHYHVQ HLVIHDDQSV  300
PQVGSYQPTP EASKFWVPDP KKKPIEGTEF DKIDIALKVY KDYAREGGEG VKPLANNVKK  360
KTNNVQTNES QSHVVNELIK RRKRASQRCG CQAKLRIRRT LENKWVVYKF LEKLNHRLVR  420
EEDYMYLKLL YHLSNANLDP TRAWKVFKEM YGGFENIGVT DVECRNYKRG LNKFIGTRDA  480
QIIVEKLLSR QEFCENFSVE FKQNKADKTL IGLFWADEQA KQYYDTFGDV VSFDATFRSN  540
RYNMVLVPFT GIDNYNRCIL FGATLLASES SKRYTWLLKR FKNFFETTPK VVVTYQDPAM  600
KIAIEEIFLD SRHRPCMWHI MQKLTRKVKY TPSDCSVQCS CLRYECYGLL CSHIFYVMRM  660
RKVDHFPTQY LQSRWSKNAL ILKSVENKKD FATASSSDSV LDYVLREIYK NVEQSVTHLD  720
AQTTLKEKAK MDVPNPPKMN TNPVYAATLG VTEPGKNDIL PPYGTCGKYT NHDSRNCQGL  780
QDDDVADAEP FKGEDMDFYY SD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	178	184	DRLKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-39	FAR1 family protein